| Protein: | CALR2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CALR2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
560.0 | [0..1] | [424..1] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MAKMIPSLVS LILIGLVAIA SAAVIFEERF DDGWENRWVK SEWKKDDNTA GEWKHTAGNW 60
61 SGDANDKGIQ TSEDYRFYAI SAEFPEFSNK DKTLVFQFSV KHEQKLDCGG GYMKLLSGDV 120
121 DQKKFGGDTP YSIMFGPDIC GYSTKKVHAI LTYNEANHLI KKDVPCETDQ LTHVYTFILR 180
181 PDATYSILID NVEKQTGSLY SDWDLLPPKK IKDPSAKKPE DWDEQEYISD PEDKKPDGYD 240
241 DIPKEIPDTD SKKPEDWDDE EDGEWTAPTI PNPEYMGEWK PKQIKNPNYK GKWEAPLIDN 300
301 PDFKDDPELY VFPKLKYVGL ELWQVKSGSL FDNVLICDDP DYAKKLADET WGKL
|
| Detection Method: |  |
| Confidence: | 127.0 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 2.94586353433162 | bayes_pls_golite062009 |
| binding | 2.22628447073433 | bayes_pls_golite062009 |
| protein binding | 1.59690189281529 | bayes_pls_golite062009 |
| integrin binding | 0.44914470874038 | bayes_pls_golite062009 |
| carbohydrate binding | 0.315905766704983 | bayes_pls_golite062009 |
| protein complex binding | 0.283682917345071 | bayes_pls_golite062009 |
| complement component C1q binding | 0.263125963729881 | bayes_pls_golite062009 |
| ion binding | 0.222418863848902 | bayes_pls_golite062009 |
| cation binding | 0.211029876587877 | bayes_pls_golite062009 |
| metal ion binding | 0.211029876587877 | bayes_pls_golite062009 |
| nucleic acid binding | 0.138676484096114 | bayes_pls_golite062009 |
| calcium ion binding | 0.0419680638917248 | bayes_pls_golite062009 |
| chaperone binding | 0.0327049405271921 | bayes_pls_golite062009 |
| receptor binding | 0.00136269572479586 | bayes_pls_golite062009 |
|
Region A: Residues: [355-424] |
1 11 21 31 41 51
| | | | | |
1 KDAEKAAFDE AEKKNEEEES KDAPAESDAE DEPEDDEGGD DSDSESKAEE TKSVDSEETS 60
61 EKDATAHDEL
|
| Detection Method: | |
| Confidence: | 0.997 |
| Match: | 1nkwT |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
