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View Structure Prediction Details

Protein: gi|15450507, gi|...
Organism: Arabidopsis thaliana
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15450507, gi|....

Description E-value Query
Range
Subject
Range
gi|21595460 - gi|21595460|gb|AAM66103.1| carbohydrate kinase-like protein [Arabidopsis thaliana]
363.0 [0..1] [471..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN  60
   61 LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE DDDEFIQVHA NNSSAASP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERWDVLGLGQ AMVDFSGVVD DEFLKKLGLE KGTRKLINHE ERGKLLQAMD GCSYKAAAGG  60
   61 SLSNTLVALA RLGSQSICDR PLNVAMAGSI GGDPLGSFYG TKLRRANVNF LSAPIKDGTT 120
  121 GTVIVLTTPD AQRTMLAYQG TSSVVNYDSC LASLIAKTNV FVVEGYLFEL PDTIRTITKA 180
  181 CEEAHRNGAL VAVTASDVSC IERHYDDFWD IVGNYADIVF ANSDEARAFC HFSAEESPIS 240
  241 ATRYMSHFVP FVSVTDGING SYIGVKGEAI YIPPSPCVPV DTCGAGDAYA SGILYGILRG 300
  301 VSDLKGMGDM AATIAATVVG QQGTRLRVQD AVELARSHAF RLNGSGVRTD VGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.154902
Match: 1tyyA
Description: Crystal structure of aminoimidazole riboside kinase from Salmonella enterica
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.11518580948187 bayes_pls_golite062009
carbohydrate kinase activity 1.99025603598964 bayes_pls_golite062009
transferase activity 1.65599843675995 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.53929419091344 bayes_pls_golite062009
kinase activity 1.44909019943198 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle