| Protein: | C3H37_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 524 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H37_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..3] | [524..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MAHRQLYSYA LQPSYAAAAS TVSPAPPPPQ QPLPPKTGLS SLYGSSADHY FPDTTYRFLA 60
61 RDGSEALSNY SGTLASSSSM YHHLPNTTAS HLAYPQLLQH QEVAWPPGVE VPGAASAVEP 120
121 LPPGVKRTSE ALYYPTLLGA HNTIGQTE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-383] |
1 11 21 31 41 51
| | | | | |
1 AWYTTDYFTK RPKLESTSHL PIYPQRAGEK DCTHYMQTRT CKFGESCRFD HPIWVPEGGI 60
61 PDWKEAPVVP NEEYPERPGE PDCPYYIKTQ RCKYGSKCKF NHPREEAAVS VETQDSLPER 120
121 PSEPMCTFYM KTGKCKFGLS CKFHHPKDIQ LPSSSQDIGS SVGLTSEPDA TNNPHVTFTP 180
181 ALYHNSKGLP VRSGEVDCPF YLKTGSCKYG ATCRYNHPER TAFIPQAAGV NYSLV
|
| Detection Method: | |
| Confidence: | 2.64 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-524] |
1 11 21 31 41 51
| | | | | |
1 SSNTANLNLG LVTPATSFYQ TLTQPTLGVI SATYPQRPGQ SECDYYMKTG ECKFGERCKF 60
61 HHPADRLSAM TKQAPQQPNV KLSLAGYPRR EGALNCPYYM KTGTCKYGAT CKFDHPPPGE 120
121 VMAKTTSEAD AAGATNTDTT Q
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
