| Protein: | PTR17_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 590 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR17_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..30] | [590..2] |
|
Region A: Residues: [1-474] |
1 11 21 31 41 51
| | | | | |
1 MVNSNEEDER RILDVEESLL TQEEVNNHLT GLSSTAEDGS IDIYGNPPSK KKTGNWKACP 60
61 FILGNECCER LAYYGIAKNL ITYYTSELHE SNVSAASDVM IWQGTCYITP LIGAVIADSY 120
121 WGRYWTIASF SAIYFIGMAL LTLSASLPVL KPAACAGVAA ALCSPATTVQ YAVFFTGLYL 180
181 IALGTGGIKP CVSSFGADQF DDTDPRERVR KASFFNWFYF SINIGSFISS TLLVWVQENV 240
241 GWGLGFLIPT VFMGVSIASF FIGTPLYRFQ KPGGSPITRV CQVLVAAYRK LKLNLPEDIS 300
301 FLYETREKNS MIAGSRKIQH TDGYKFLDKA AVISEYESKS GAFSNPWKLC TVTQVEEVKT 360
361 LIRMFPIWAS GIVYSVLYSQ ISTLFVQQGR SMNRIIRSFE IPPASFGVFD TLIVLISIPI 420
421 YDRFLVPFVR RFTGIPKGLT DLQRMGIGLF LSVLSIAAAA IVETVRLQLA QDFV
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [475-590] |
1 11 21 31 41 51
| | | | | |
1 AMSIFWQIPQ YILMGIAEVF FFIGRVEFFY DESPDAMRSV CSALALLNTA VGSYLSSLIL 60
61 TLVAYFTALG GKDGWVPDDL NKGHLDYFFW LLVSLGLVNI PVYALICVKH TKKKAL
|
| Detection Method: | |
| Confidence: | 0.965 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
