| Protein: | gi|218202602 |
| Organism: | Oryza sativa Indica Group |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218202602.
| Description | E-value | Query Range |
Subject Range |
|
|
220.0 | [0..1] | [428..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MGFLSLLLVA SMPIVQVLLI GVIGAFLASG YSKILTSSAL RDMNKVVFTV FTPSLMFASL 60
61 AKTVTLSDVI SWWFMPVNIG ITFIVGGTLG WIACKILKPP QHFRGMIIAF CSAGNLGNLL 120
121 LIIVPAVCDE DGNPFGKDRS LCRSRGLSYS SLSMALGGLF IWTHT
|
| Detection Method: |  |
| Confidence: | 4.585027 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-247] |
1 11 21 31 41 51
| | | | | |
1 YSLMQKAGKM YHKMQSKSIQ CPADSDEEHH PAQGHDQVKL DGETAYADEE AALLVSAKLA 60
61 PEHNEENQME APLLTCEREI AN
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [248-428] |
1 11 21 31 41 51
| | | | | |
1 KGGFWTNLKE TVHQVVEELM APPTVSAILG FVVGLVPWLK SLVIGNGAPL RVIQESLQLM 60
61 GNGTIPCITL ILGGNLTQGL RKSVLKRTVI ITIVCIRYVI QPLIGMAVVH AAYGVGFLPH 120
121 DPLYRYVLMM QFALPPAMNI GTMAQLFDVG QEECSVIFLW TYLIAAIALT TWSTIFMSIL 180
181 S
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
