| Protein: | gi|79510351, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79510351, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
413.0 | [0..1] | [569..1] |
|
|
329.0 | [0..1] | [569..15] |
|
|
265.0 | [0..58] | [525..97] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MEMLRSSDQS QFVSYDASSA ASSSPYLLDN FYGWSNQKPQ EFFKEEAQLA AAASMADSTI 60
61 LTTFVDPQSH HSQNHIPKLE DFLGDSSSIV RYSDNSQTDT QDSSLTQIYD PRHHHNQTGF 120
121 YSDHHDFKTM AGFQSAFSTN SGSEVDDSAS IGRTHLAGDY LGHVVESSGP ELGFHGGSTG 180
181 ALSLGVNVNN NTNHRNDNDN HYRGNNNGER INNNNNNDNE KTDSEKE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [228-332] |
1 11 21 31 41 51
| | | | | |
1 KAVVAVETSD CSNKKIADTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQARKGRQV 60
61 YLGGYDKEDK AARAYDLAAL KYWNATATTN FPITNYSKEV EEMKH
|
| Detection Method: | |
| Confidence: | 11.677781 |
| Match: | PF00847.12 |
| Description: | No description for PF00847.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-478] |
1 11 21 31 41 51
| | | | | |
1 MTKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFATEEEA 60
61 AEAYDIAAIK FRGINAVTNF EMNRYDVEAI MKSALPIGGA AKRLKLSLEA AASSEQKPIL 120
121 GHHQLHHFQQ QQQQQQLQLQ SSPNHS
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [479-569] |
1 11 21 31 41 51
| | | | | |
1 SINFALCPNS AVQSQQIIPC GIPFEAAALY HHHQQQQQHQ QQQQQQNFFQ HFPANAASDS 60
61 TGSNNNSNVQ GTMGLMAPNP AEFFLWPNQS Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
