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View Structure Prediction Details

Protein: gi|218194041
Organism: Oryza sativa Indica Group
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218194041.

Description E-value Query
Range
Subject
Range
gi|50919915, gi|... - gi|50919915|ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)], gi...
358.0 [0..1] [460..17]

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Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGTQWSNVS STYCKDMASS VYRPHSVTIT EFGAVGDGVT LNTKAFQNAI FYLNSFADKG  60
   61 GAQLFVPAGR WLTGSFSLIS HLTLSLDKDA EIIGSPDSSD WPVIDPLPSY GRGRELPGKR 120
  121 HQSLIFGTNL TDVIITGANG TIDGQGAIWW DWFHSNTLNY TRPHLVELMY STDVVISNLT 180
  181 FKNSPFWNIH PVYCSQVLVQ HVTILAPLNS PNTDGIDPDS STNVCIDHCY VRNGDDVIVI 240
  241 KSGWDEYGIS FARPSTNISI SNITGETRGG AGIAFGSEMS GGISEVRAEG LRIVNSMHGI 300
  301 RIKTAPGRGG YVKNVYISDV SMDNVSMAIR ITGNFGEHPD DKYDRNALPM ISNITIENVV 360
  361 GVNVGVAGIL EGIEGDNFSS ICLSNVSLSV QSMHPWNCSL IEGYSNSVIP ESCEQLRTDC 420
  421 GQTPICYDGG SSSAIHAQAA RHRLSSASRL LNPLLKLAML 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.154902
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle