YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|52696120
Organism:	Pyrococcus furiosus
Length:	98 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52696120.

Description	E-value	Query Range	Subject Range
gi\|5458838 - gi\|5458838\|emb\|CAB50325.1\| moaD molybdopterin synthase, small subunit [Pyrococcus abyssi GE5] gi\|7519992, gi\|5... - pir\|\|H75053 molybdopterin converting factor, chain 1 (moad) PAB3357 - Pyrococcus abyssi (strain Orsa...	114.0	[0..10]	[98..1]
gi\|57642053, gi\|... - gi\|57642053\|ref\|YP_184531.1\| molybdopterin converting factor, subunit 1 [Thermococcus kodakarensis K...	114.0	[0..10]	[98..1]
gi\|33359306 - gi\|33359306\|ref\|NP_877770.1\| putative molybdopterin converting factor, subunit 1 [Pyrococcus horikos...	112.0	[0..10]	[98..1]
gi\|18976915, gi\|... - gi\|18976915\|ref\|NP_578272.1\| molybdopterin converting factor, subunit 1 [Pyrococcus furiosus DSM 363...	112.0	[0..11]	[98..3]
gi\|171993327, gi... - gi\|172060810\|ref\|YP_001808462.1\| molybdopterin converting factor, subunit 1 [Burkholderia ambifaria ... gi\|171096945, gi... - gi\|171317876\|ref\|ZP_02907053.1\| molybdopterin converting factor, subunit 1 [Burkholderia ambifaria M... gi\|74019145, gi\|... - gi\|74019145\|ref\|ZP_00689763.1\| Molybdopterin converting factor, subunit 1 [Burkholderia ambifaria AM...	102.0	[0..10]	[98..1]
gi\|124894831, gi... - gi\|84362038\|ref\|ZP_00986675.1\| COG1977: Molybdopterin converting factor, small subunit [Burkholderia...	102.0	[0..10]	[98..1]
gi\|119769159, gi... - gi\|68545076\|ref\|ZP_00584627.1\| Molybdopterin converting factor, subunit 1 [Shewanella amazonensis SB...	101.0	[0..12]	[98..2]
gi\|67543768, gi\|... - gi\|67543768\|ref\|ZP_00421699.1\| Molybdopterin converting factor, subunit 1 [Burkholderia vietnamiensi...	101.0	[0..10]	[98..1]
gi\|83720736, gi\|... - gi\|83720736\|ref\|YP_442722.1\| molybdopterin converting factor, subunit 1 [Burkholderia thailandensis ...	101.0	[0..9]	[98..2]

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Predicted Domain #1

Region A:
Residues: [1-98]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHHHHHHGSV KVKVKYFARF RQLAGVDEEE IELPEGARVR DLIEEIKKRH EKFKEEVFGE  60
   61 GYDEDADVNI AVNGRYVSWD EELKDGDVVG VFPPVSGG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.39794
Match:	1vjkA
Description:	Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits