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View Structure Prediction Details

Protein: gi|47169195, gi|...
Organism: Escherichia coli
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47169195, gi|....

Description E-value Query
Range
Subject
Range
T2E5_ECOLX - Type-2 restriction enzyme EcoRV OS=Escherichia coli GN=ecoRVR PE=1 SV=3
417.0 [0..1] [244..2]
gi|32265738, gi|... - gi|32265738|ref|NP_859770.1| type II restriction endonuclease [Helicobacter hepaticus ATCC 51449], g...
322.0 [0..4] [243..15]

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Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLRSDLINAL YDENQKYDVC GIISAEGKIY PLGSDTAVLS TIFELFSRPI INKIAEKHGY  60
   61 IVEEPKQQNH YPDFTLYKPS EPNKKIAIDI KTTYTNKENE KIKFTLGGYT SFIRNNTKNI 120
  121 VYPFDQYIAH WIIGYVYTRV ATRKSSLKTY NINELNEIPK PYKGVKVFLQ DKWVIAGDLA 180
  181 GSGNTTNIGS IHAHYKDFVE GKGIFDSEDE FLDYWRNYER TSQLRNDKYN NISEYRNWIY 240
  241 RGRK

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Detection Method: PSI-BLAST
Confidence: 117.0
Match: 1eo3A
Description: Restriction endonuclease EcoRV
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.286388432783973 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle