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View Structure Prediction Details

Protein: gi|218189681
Organism: Oryza sativa Indica Group
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218189681.

Description E-value Query
Range
Subject
Range
gi|15239754, gi|... - gi|30017309|gb|AAP12888.1| At5g48970 [Arabidopsis thaliana], gi|26449838|dbj|BAC42042.1| putative mi...
293.0 [0..4] [329..9]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSEEEPSQM RRALVDALAG AISGGISRTV TSPLDVIKIR FQVQLEPTTS WGVLRRDVYG  60
   61 PSKYTGLLQA SKDILREEGL PGFWRGNVPA LLMYMPYTAI QFTVLHKLKT FASGSSKTED 120
  121 HLHLSPYLSY VSGAIAGCAA TVGSYPFDLL RTILASQGEP KVYPDMRSAF LDIMKTRGFR 180
  181 GLYAGLTPTL VEIIPYAGLQ FGSYDTFKRS MMTWNRYRYS HLNSGSEDDS VSSFQLFLCG 240
  241 FAAGTFSKAA CHPLDVVKKR FQIEGLKRHP RYGARIESST YKGMYHALKE IVAKEGFGGL 300
  301 YKGLFPSLVK SAPAGAVTFV AYEYISDWIG SKAGVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle