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View Structure Prediction Details

Protein: gi|218188460
Organism: Oryza sativa Indica Group
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218188460.

Description E-value Query
Range
Subject
Range
gi|110742984, gi... - gi|29028814|gb|AAO64786.1| At2g25950 [Arabidopsis thaliana], gi|21593506|gb|AAM65473.1| unknown [Ara...
291.0 [0..1] [204..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLHDHSCE DHNCAADWSL FNHIDVPKVV ALNESVAGSV KSVFKPWEQR LDTSGGFLES  60
   61 NEGDPELLVF IPFTSDVKIK SISVVGGADG TSPSRMRAFI NREGIDFNDA QNMQPVQEWE 120
  121 LAENLQGVLE YQTRYSRFQG VANLTLHFPE NFGGDTTKIY YIGLRGEATQ NKRDVVATIV 180
  181 YEIMPNPSDH KTKSETGGGF SHVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1wwyA
Description: Solution structure of the DUF1000 domain of a thioredoxin-like protein 1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle