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View Structure Prediction Details

Protein: gi|218188753
Organism: Oryza sativa Indica Group
Length: 650 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218188753.

Description E-value Query
Range
Subject
Range
gi|12324976, gi|... - pir||C96834 unknown protein F5I6.3 [imported] - Arabidopsis thaliana, gi|23198130|gb|AAN15592.1| un...
546.0 [0..5] [640..2]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGGKGWVE RARRGVKTAW FMVAMVASLL MASAPALVAA GDVAVALWLE VRLGCLRCHG  60
   61 LRGHLERYGF RSSLVDIPLV SIARSVVITC VYLMSDASGL SHGPYLGTAT CCSLASLLIL 120
  121 LIKASVYSPA QEIGPELSPS LADHKLSLKK LSGMPVLFLS SLVFALGHVV VAYRTSCRAR 180
  181 RKLLIHGIDP ESILAYKNAY PGCYKT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [207-650]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRSPTPYSGK FYSRSDSETK RKSVAHDDRD IPISFLADGD SMFIACQGIT VHYKLSDPSS  60
   61 CISSATDTFP EIHHDVISAS ISPRRQRHDS PPSASTNTRR LLNRSFSHQY HQTSLYAPLL 120
  121 VEPVTSPTLS DDTPVLSVDD GSADVCLKPM GFDLEAGEQG KFAVVLVHGF GGGVFSWRHV 180
  181 TNLLSRQVGC TVLAFDRPGW GLTSRPRRKD WEDKNLPNPY ELGSQVDLLI SFCSDMGLRS 240
  241 VVLVGHDDGG LLALKAAEKL RASGDSRKVE VKGVVLIGVS LSREVIPAFA RILLHTPLRK 300
  301 KHMVRPLLRT EITQVINRRA WFDATKLTTD VLNLYKAPLF VEGWDEALHE VGRLSFSTVL 360
  361 SSKRAADLLR SVEDLPVLVV AGSEDALVSS KSTQVMASRL VNSRLVTISN CGHLPHEECP 420
  421 KALLSALSPF ISGLVSSDDS LQRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.39794
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle