| Protein: | gi|218201399 |
| Organism: | Oryza sativa Indica Group |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218201399.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..1] | [667..6] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MEEKRIARIS VTWRGRQLDV DADPSCTVKE FGQLLQDLTS VNPETLKLIV PQSTNKGSKL 60
61 ITPFSDPHSV LTLKEAAISD GKPIRMMGVF NDEIEEVSDN GKRTDLRIIG FEEEEQRLRQ 120
121 RTSGR
|
| Detection Method: |  |
| Confidence: | 21.221849 |
| Match: | 1v5tA |
| Description: | Solution Structure of the Ubiquitin-like Domain from Mouse Hypothetical 8430435I17Rik Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [126-324] |
1 11 21 31 41 51
| | | | | |
1 PQVPLKLPQG QYIFCDFRTL HLPGIELNPP PSEALKRMHM LACDPGIIAI MNKHRWRVGI 60
61 MTEMAPVGYV GVSPKCILGF NKNMGEEISL RLRTDDLKGF RKYESIKRTL LHELAHMVHS 120
121 EHDANFFALN KQLNDEAASL DWTKSRGHVL SGRKIFDSYE DEFVLEPDSV VVGHKLGGGS 180
181 SSLASARVLS GSAAYKRFL
|
| Detection Method: | |
| Confidence: | 70.508638 |
| Match: | PF08325.1 |
| Description: | No description for PF08325.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [325-566] |
1 11 21 31 41 51
| | | | | |
1 NASADLESSK DSVTIPGNEI LVPNTKFEPD PDDVGQDFSQ DNTKVEPDPD DNDDMNVDVG 60
61 TGASWSSVSR SFTEQDTISH SEPDPDDIHQ QSTAGCLEPD PDDSSNVDIL SQELTIDGKQ 120
121 NGEPDPDDNG TSKFIPEPVN KMEVETELGS NFAVQNSEPD PDDSSNAILN KKLGTDRSDE 180
181 TTCEAVVEEC VNKMEVETEQ SRNSTMSKSE PDPDDHAANS NISELQRIEE PVAALCARLQ 240
241 KA
|
| Detection Method: | |
| Confidence: | 1.31 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [567-669] |
1 11 21 31 41 51
| | | | | |
1 IEMLRSQATP TEATSALQTL FKIIKNVIEH PHDIKYRRLR KSNPQFQRSV ANYKAAMEVL 60
61 ELIGFCEDVV SDEIGRAETY LVLKRNDPGL LWLAKASLEV SMA
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 2hplA |
| Description: | No description for 2hplA was found. |
