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View Structure Prediction Details

Protein: gi|218193445
Organism: Oryza sativa Indica Group
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218193445.

Description E-value Query
Range
Subject
Range
CDC73_ARATH - Protein CDC73 homolog OS=Arabidopsis thaliana GN=CDC73 PE=1 SV=1
358.0 [0..1] [375..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLAVLRDY AARGDLDKII FSGDEVLFGS EYTFPANAPT AFTNKQSGRP YPLSAAVFLA  60
   61 QHNDLKHTDF IQAARLRRIP PVSLPDRKTF LDFLRHGHHS LPTDPLLPSA LPSFAPEPQP 120
  121 AMP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEPEGDKASG AYIRALERTL KDRNALLDAR GRDFLAVLQN ATRREEERRR NKDSAPSSAR  60
   61 HEPSSAAAAA AMAKPKVERS FGDG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [208-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVPIILVPSA SQTLITIYNV REFLEDGVFV PSDERMRAMK GSGKPECVMV QKKLIRGERA  60
   61 GAGGGATTFE VRDKPASLKA DDWARVVAVF VLGKEWQFKD WPFKDHVEIF NKVIGFYVRF 120
  121 EDDSVEAAKV VKQWNVKIIS ISKNKRHQDR TAALEVWERL EEFMRAHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle