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View Structure Prediction Details

Protein: IPK1_ORYSI
Organism: Oryza sativa Indica Group
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPK1_ORYSI.

Description E-value Query
Range
Subject
Range
gi|116310041 - gi|116310041|emb|CAH67064.1| H0112G12.9 [Oryza sativa (indica cultivar-group)]
559.0 [0..1] [445..1]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVLHEGDA KDWVYKGEGA ANLILSYTGS SPSMLGKVLR VKKILKDKGQ PAPNCIVFSS  60
   61 HEEHLWGKIP GLLESVKNDC LPQAYATIVM SQHLGANHVD GGVRVRVSKN FFELAGKNVL 120
  121 DNRPAWRVNA SAIDAGADSA LLISDHTLFS GNPRGSSCIA VEIKAKCGFL PSSEYISKEN 180
  181 SIKKQVTRYK MHQHLKFHLG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EISKTSEYDP LDLFSGSKER IHMAIKSFFS TPQNNFRIFV DGSLVFGGMG GGADSVHPNE  60
   61 TEKCLEDLSK VTGLQLSDFI ELLSEAIFKS GVLGKLLATQ KLDDH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIEGAIHLYY NIISQPCLVC KSITDTELLR KYSTLHSLPL DKSEKIVRDF LISATAKDCS  60
   61 LMISFRPRQS GTTDSEYDSV FLDSVNQSYD YKAYFIDLDV KPLDKMVHYF KLDQKIVNFY 120
  121 TRNGEVGGDP RDPPKGCGPR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle