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View Structure Prediction Details

Protein: gi|218195959
Organism: Oryza sativa Indica Group
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218195959.

Description E-value Query
Range
Subject
Range
gi|21554137 - gi|21554137|gb|AAM63217.1| unknown [Arabidopsis thaliana]
354.0 [0..31] [268..56]
gi|51965034, gi|... - gi|51979699|ref|XP_507596.1| PREDICTED OJ1191_A10.128 gene product [Oryza sativa (japonica cultivar-...
262.0 [0..31] [238..134]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAAPPAAS GARRLGRPRA GLRVGAVAAA EGPSCLYVGP IETASQEMLE ALYHQARDSY  60
   61 YSGQPLIVDD MFDKVELKLR VYGSPSVVKY PRCSLKRQST YA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAEEDKSMFM ALSSIWMLLL LFGTSAFLVP SLCILSLTFG DAFGARYLLY GAKSFDVITR  60
   61 VNDMVLIGLG YLIGYPISSA SVGALQGLLT NNLVALKGSC PNCGEQVFAF VKTDNSIKAP 120
  121 HRAECHVCSC PLEYRTKVEK SLSGTRRTWV YGRVYLVKQG HPRKRKWLKD 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle