YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|188017443, gi...
Organism:	Escherichia coli O157:H7 str. EC4113
Length:	169 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|188017443, gi....

Description	E-value	Query Range	Subject Range
gi\|192926305, gi... - gi\|75255880\|ref\|ZP_00727619.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	137.0	[0..1]	[169..1]
gi\|194429639, gi... - gi\|75209089\|ref\|ZP_00709344.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	135.0	[0..1]	[169..1]
gi\|75511836 - gi\|75511836\|ref\|ZP_00734454.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	135.0	[0..1]	[169..1]
gi\|33151785, gi\|... - gi\|33151785\|ref\|NP_873138.1\| dATP pyrophosphohydrolase [Haemophilus ducreyi 35000HP], gi\|33148006\|gb...	129.0	[0..20]	[169..1]
gi\|53733203 - gi\|53733203\|ref\|ZP_00156157.2\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	124.0	[0..25]	[167..4]
gi\|112822695, gi... - gi\|113460652\|ref\|YP_718718.1\| dATP pyrophosphohydrolase [Haemophilus somnus 129PT], gi\|112822695\|gb\|... gi\|168826174, gi... - gi\|46156589\|ref\|ZP_00132407.2\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	122.0	[0..25]	[164..3]
gi\|56383529, gi\|... - gi\|56479978\|ref\|NP_707724.2\| dATP pyrophosphohydrolase [Shigella flexneri 2a str. 301], gi\|56383529\|... gi\|110615357, gi... - gi\|110805809\|ref\|YP_689329.1\| dATP pyrophosphohydrolase [Shigella flexneri 5 str. 8401], gi\|11061535... gi\|30063275, gi\|... - gi\|30063275\|ref\|NP_837446.1\| dATP pyrophosphohydrolase [Shigella flexneri 2a str. 2457T], gi\|3004152... tr\|A0A120MCW7\|A0... - Dihydroneopterin triphosphate diphosphatase OS=Escherichia coli (strain K12) GN=nudB PE=4 SV=1 gi\|75190894 - gi\|75190894\|ref\|ZP_00704161.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ... gi\|83585534 - gi\|83585534\|ref\|ZP_00924178.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	121.0	[0..10]	[169..1]
gi\|30995367 - gi\|30995367\|ref\|NP_438482.2\| dATP pyrophosphohydrolase [Haemophilus influenzae Rd KW20]	121.0	[0..25]	[168..9]
gi\|85059236, gi\|... - gi\|85059236\|ref\|YP_454938.1\| dATP pyrophosphohydrolase [Sodalis glossinidius str. 'morsitans'], gi\|8...	120.0	[0..24]	[166..2]
NUDB_HAEIN - Dihydroneopterin triphosphate pyrophosphatase OS=Haemophilus influenzae GN=nudB PE=3 SV=1 NUDB_HAEIN - Dihydroneopterin triphosphate diphosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121...	120.0	[0..25]	[168..13]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIDNYVNGM SEGSQRRGSV KDKVYKRPVS ILVVIYAQDT KRVLMLQRRD DPDFWQSVTG  60
   61 SVEEGETAPQ AAMREVKEEV TIDVVAEQLT LIDCQRTVEF EIFSHLRHRY APGVTRNTES 120
  121 WFCLALPHER QIVFTEHLAY KWLDAPAAAA LTKSWSNRQA IEQFVINAA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.39794
Match:	2o1cA
Description:	No description for 2o1cA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits