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View Structure Prediction Details

Protein: gi|218193579
Organism: Oryza sativa Indica Group
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218193579.

Description E-value Query
Range
Subject
Range
YIPL_SOLTU - Protein yippee-like OS=Solanum tuberosum PE=2 SV=1
206.0 [0..1] [129..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLFVMHLE GKVYSCKHCH THLGLSSDII SKSFHCKHGK AYLFNKVVNV TSGVKEDRMM  60
   61 ITGMHTVSDI FCVGCGSIVG WKYEAAHEKS QRYKEGKFIL ERYKVSGPDG SHYFVTHDAH 120
  121 VGGSDVDDV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 1zu1A
Description: Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.71755880039503 bayes_pls_golite062009
nucleic acid binding 0.0828253815733649 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle