| Protein: | gi|119619970, gi... |
| Organism: | Homo sapiens |
| Length: | 584 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119619970, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [11..584] | [114..687] |
|
|
0.0 | [11..584] | [48..621] |
|
|
0.0 | [11..584] | [366..963] |
|
|
0.0 | [11..584] | [345..918] |
|
|
0.0 | [11..583] | [335..906] |
|
|
0.0 | [11..583] | [262..833] |
|
|
0.0 | [11..583] | [334..905] |
|
Region A: Residues: [1-334] |
1 11 21 31 41 51
| | | | | |
1 MDGWRRPLQS VGKVCEKNMK TSEMHTMSGA QTGRKEKGDP LNIAIDKMTK KTRDLRRQLR 60
61 KAVMDHISDS FLETNVPLLV LIEAAKSGNE KEVKEYAQVF REHANKLVEV ANLACSISNN 120
121 EEGVKLVRMA ATQIDSLCPQ VINAALTLAA RPQSKVAQDN MDVFKDQWEK QVRVLTEAVD 180
181 DITSVDDFLS VSENHILEDV NKCVIALQEG DVDTLDRTAG AIRGRAARVI HIINAEMENY 240
241 EAGVYTEKVL EATKLLSETV MPRFAEQVEV AIEALSANVP QPFEENEFID ASRLVYDGVR 300
301 DIRKAVLMIR TPEELEDDSD FEQEDYDVRS RTSV
|
| Detection Method: |  |
| Confidence: | 108.0 |
| Match: | 1l7cA |
| Description: | alpha-catenin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [335-584] |
1 11 21 31 41 51
| | | | | |
1 QTEDDQLIAG QSARAIMAQL PQEEKAKIAE QVEIFHQEKS KLDAEVAKWD DSGNDIIVLA 60
61 KQMCMIMMEM TDFTRGKGPL KNTSDVINAA KKIAEAGSRM DKLARAVADQ CPDSACKQDL 120
121 LAYLQRIALY CHQLNICSKV KAEVQNLGGE LIVSGLDSAT SLIQAAKNLM NAVVLTVKAS 180
181 YVASTKYQKV YGTAAVNSPV VSWKMKAPEK KPLVKREKPE EFQTRVRRGS QKKHISPVQA 240
241 LSEFKAMDSF
|
| Detection Method: | |
| Confidence: | 67.69897 |
| Match: | 1rkeB |
| Description: | Human vinculin head (1-258) in complex with human vinculin tail (879-1066) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.425289494704085 | bayes_pls_golite062009 |
| protein binding | 0.19527989782766 | bayes_pls_golite062009 |
