YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|167514428, gi...
Organism:	Bacillus anthracis str. A0193
Length:	657 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167514428, gi....

Description	E-value	Query Range	Subject Range
gi\|228844183, gi... - gi\|228915536\|ref\|ZP_04079125.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|65320220 - gi\|65320220\|ref\|ZP_00393179.1\| COG1368: Phosphoglycerol transferase and related proteins, alkaline p... gi\|228946549, gi... - gi\|228946549\|ref\|ZP_04108864.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|228831679, gi... - gi\|228927989\|ref\|ZP_04091034.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|229122485, gi... - gi\|229122485\|ref\|ZP_04251698.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|229091943, gi... - gi\|229091943\|ref\|ZP_04223131.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ...	0.0	[1..657]	[8..664]
gi\|47568753, gi\|... - gi\|47568753\|ref\|ZP_00239448.1\| phosphoglycerol transferase [Bacillus cereus G9241], gi\|47554533\|gb\|E...	0.0	[1..657]	[1..657]
gi\|30257539, gi\|... - gi\|30262906\|ref\|NP_845283.1\| sulfatase [Bacillus anthracis str. Ames], gi\|30257539\|gb\|AAP26769.1\| su...	0.0	[1..657]	[1..657]
gi\|51976045, gi\|... - gi\|52142576\|ref\|YP_084253.1\| phosphoglycerol transferase [Bacillus cereus E33L], gi\|51976045\|gb\|AAU1...	0.0	[1..657]	[1..657]
gi\|49330613, gi\|... - gi\|49479057\|ref\|YP_037012.1\| phosphoglycerol transferase [Bacillus thuringiensis serovar konkukian s...	0.0	[1..657]	[1..657]
gi\|221240495, gi... - gi\|222096437\|ref\|YP_002530494.1\| sulfatase [Bacillus cereus Q1], gi\|221240495\|gb\|ACM13205.1\| sulfata... gi\|42782043, gi\|... - gi\|42782043\|ref\|NP_979290.1\| sulfatase [Bacillus cereus ATCC 10987], gi\|42737967\|gb\|AAS41898.1\| sulf...	0.0	[1..657]	[1..657]
gi\|29896602, gi\|... - gi\|30021049\|ref\|NP_832680.1\| phosphoglycerol transferase [Bacillus cereus ATCC 14579], gi\|29896602\|g...	0.0	[1..657]	[1..657]
gi\|16799998 - gi\|16799998\|ref\|NP_470266.1\| hypothetical protein lin0927 [Listeria innocua Clip11262] gi\|25307041, gi\|... - pir\|\|AG1548 hypothetical transmembrane protein lin0927 [imported] - Listeria innocua (strain Clip112...	0.0	[1..649]	[1..653]
gi\|225876008, gi... - gi\|226223546\|ref\|YP_002757653.1\| hypothetical protein Lm4b_00946 [Listeria monocytogenes Clip81459],... gi\|254823803 - gi\|254823803\|ref\|ZP_05228804.1\| hypothetical protein LmonFS_01505 [Listeria monocytogenes FSL J1-194... gi\|254852420 - gi\|254852420\|ref\|ZP_05241768.1\| hypothetical protein LmonoFSL_03611 [Listeria monocytogenes FSL R2-5... gi\|254878329 - gi\|254878329\|ref\|ZP_05251039.1\| hypothetical protein LmonFSL_04006 [Listeria monocytogenes FSL J2-07... gi\|254898900 - gi\|254898900\|ref\|ZP_05258824.1\| hypothetical protein LmonJ_03765 [Listeria monocytogenes J0161] gi\|254911612 - gi\|254911612\|ref\|ZP_05261624.1\| hypothetical protein LmonJ2_02360 [Listeria monocytogenes J2818] gi\|254992926 - gi\|254992926\|ref\|ZP_05275116.1\| hypothetical protein LmonocytoFSL_07674 [Listeria monocytogenes FSL ... gi\|255027134 - gi\|255027134\|ref\|ZP_05299120.1\| hypothetical protein LmonocytFSL_13813 [Listeria monocytogenes FSL J... gi\|47092136, gi\|... - gi\|47092136\|ref\|ZP_00229929.1\| sulfatase family protein [Listeria monocytogenes str. 4b H7858], gi\|4... gi\|224499466 - gi\|224499466\|ref\|ZP_03667815.1\| hypothetical protein LmonF1_07087 [Listeria monocytogenes Finland 19... gi\|255520491 - gi\|255520491\|ref\|ZP_05387728.1\| hypothetical protein LmonocFSL_04541 [Listeria monocytogenes FSL J1-... gi\|25307039, gi\|... - pir\|\|AG1190 hypothetical transmembrane protein lmo0927 [imported] - Listeria monocytogenes (strain E... gi\|224503105 - gi\|224503105\|ref\|ZP_03671412.1\| hypothetical protein LmonFR_11383 [Listeria monocytogenes FSL R2-561... gi\|46907161, gi\|... - gi\|46907161\|ref\|YP_013550.1\| sulfatase family protein [Listeria monocytogenes str. 4b F2365], gi\|468... gi\|16802967 - gi\|16802967\|ref\|NP_464452.1\| hypothetical protein lmo0927 [Listeria monocytogenes EGD-e] gi\|47015359, gi\|... - gi\|47096214\|ref\|ZP_00233812.1\| sulfatase family protein [Listeria monocytogenes str. 1/2a F6854], gi... gi\|254832106, gi... - gi\|254832106\|ref\|ZP_05236761.1\| hypothetical protein Lmon1_12199 [Listeria monocytogenes 10403S], gi... gi\|133727759, gi... - gi\|153166243\|ref\|ZP_01926862.1\| hypothetical protein LMHG_00111 [Listeria monocytogenes FSL N1-017],... gi\|153173860, gi... - gi\|254827872\|ref\|ZP_05232559.1\| hypothetical protein LmonocytogeFSL_05370 [Listeria monocytogenes FS... gi\|153179045, gi... - gi\|254935938\|ref\|ZP_05267635.1\| hypothetical protein LmonF6_02365 [Listeria monocytogenes F6900], gi... gi\|254931311, gi... - gi\|254931311\|ref\|ZP_05264670.1\| hypothetical protein LmonH_02727 [Listeria monocytogenes HPB2262], g...	0.0	[1..647]	[1..651]
gi\|7445526, gi\|2... - pir\|\|D69815 conserved hypothetical protein yfnI - Bacillus subtilis, gi\|2116767\|dbj\|BAA20118.1\| Yfn... gi\|221317812 - gi\|221317812\|ref\|ZP_03599106.1\| hypothetical protein BsubsJ_03983 [Bacillus subtilis subsp. subtilis... gi\|221312888 - gi\|221312888\|ref\|ZP_03594693.1\| hypothetical protein BsubsN3_04029 [Bacillus subtilis subsp. subtili... gi\|221322086 - gi\|221322086\|ref\|ZP_03603380.1\| hypothetical protein BsubsS_04074 [Bacillus subtilis subsp. subtilis... gi\|221308563 - gi\|221308563\|ref\|ZP_03590410.1\| hypothetical protein Bsubs1_04073 [Bacillus subtilis subsp. subtilis...	0.0	[2..643]	[9..651]

Back

Predicted Domain #1

Region A:
Residues: [1-241]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFLLKSKS VLSNHFGFFL FAVILFWLKT YAAYVTEFNL GISNTIQKFL LFFNPLSSAV  60
   61 LFLGLALFAK GKRSYIWLIV INLLLSILLY ANVVYYRFFS DFITFPTLTQ TNNFGDLGGS 120
  121 IVALLHLYDP LYFLDTIILI VLVATKFANP KPIRVAKYKV SLVFVAGILL FSVNLGLAES 180
  181 DRPELLTRTF DRNYIVKYLG AYNYTIYDGI QSAKASTERA LADGDNMTEV RNYLTSTYAS 240
  241 P

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [242-657]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEYFGKGKG MNVIYIHLES FQNFLIDYKL NGQEVTPFLN SFTKDANTLY FDNFFHQTGQ  60
   61 GKTSDAEFML ENSMFGLPQG SVFTTKSHNT YQSAPAILGQ QGYTSAVFHG NYKTFWNRDD 120
  121 IYKSFGFNKF FDASYYDMNE KDVVNYGLKD KPFFNESIPL LETLKQPFYT KFITLSNHFP 180
  181 YPIDKEEATI EPANTGDSSV DTYFQTARYL DESVKGFIDY LKQSGLYDNS IIVMYGDHYG 240
  241 ISDNHNAAMS KVMGKEINSF ENAQLQRVPL IVRVPGVKGG VQHQYGGEID VLPTLLHLLG 300
  301 TDTKNYVQFG SDLLSPDHKQ VVAFRNGNFV SPTVTALNGK YYDTTTGKPV EFTDEIKQNE 360
  361 QMVQNSLKYS DQVVNGDLLR FYTPEGFTPI DRSKYNYNNR DKNKTKVKTA PEGEAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.522879
Match:	1e33P
Description:	Arylsulfatase A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.68372961800329	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.55034747447774	bayes_pls_golite062009
hydrolase activity	1.50712564257206	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: