YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|196026096, gi...
Organism:	Bacillus cereus 03BB108
Length:	272 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|196026096, gi....

Description	E-value	Query Range	Subject Range
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	1.0E-52	[1..272]	[1..272]
gi\|42782087, gi\|... - gi\|42782087\|ref\|NP_979334.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 10987], gi\|4273...	2.0E-52	[1..272]	[1..272]
gi\|163862929, gi... - gi\|89208025\|ref\|ZP_01186549.1\| Delta 1-pyrroline-5-carboxylate reductase [Bacillus weihenstephanensi...	4.0E-52	[1..272]	[1..272]
gi\|49330599, gi\|... - gi\|49479043\|ref\|YP_037056.1\| pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar konku...	8.0E-52	[1..272]	[1..272]
gi\|52142529, gi\|... - gi\|52142529\|ref\|YP_084300.1\| pyrroline-5-carboxylate reductase [Bacillus cereus E33L], gi\|51975998\|g...	9.0E-52	[1..272]	[1..272]
gi\|67849921, gi\|... - gi\|67916119\|ref\|ZP_00509840.1\| Delta 1-pyrroline-5-carboxylate reductase [Clostridium thermocellum A... gi\|196251994, gi... - gi\|196251994\|ref\|ZP_03150658.1\| pyrroline-5-carboxylate reductase [Clostridium thermocellum DSM 4150...	3.0E-51	[1..268]	[1..268]
gi\|167532035, gi... - gi\|167631737\|ref\|ZP_02390064.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0442], g... gi\|167514661, gi... - gi\|167637154\|ref\|ZP_02395434.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0193], g... gi\|170671266, gi... - gi\|170685006\|ref\|ZP_02876231.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0465], g... gi\|170705216, gi... - gi\|170705216\|ref\|ZP_02895681.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0389], g... gi\|177649865, gi... - gi\|177649865\|ref\|ZP_02932866.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0174], g... gi\|49185927, gi\|... - gi\|49185927\|ref\|YP_029179.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Sterne], gi\|... gi\|47503581, gi\|... - gi\|47528433\|ref\|YP_019782.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. 'Ames Ancest... gi\|30263087, gi\|... - gi\|30263087\|ref\|NP_845464.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Ames], gi\|30... gi\|254760978 - gi\|254760978\|ref\|ZP_05213002.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Australia... gi\|254752460 - gi\|254752460\|ref\|ZP_05204496.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Vollum] gi\|21401019, gi\|... - gi\|65320395\|ref\|ZP_00393354.1\| COG0345: Pyrroline-5-carboxylate reductase [Bacillus anthracis str. A... gi\|254742684 - gi\|254742684\|ref\|ZP_05200369.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Kruger B] gi\|254738146 - gi\|254738146\|ref\|ZP_05195849.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Western N... gi\|254685679 - gi\|254685679\|ref\|ZP_05149538.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CNEVA-906... gi\|229600273, gi... - gi\|229600273\|ref\|YP_002867357.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0248], ...	4.0E-50	[1..272]	[1..276]
gi\|229046689, gi... - gi\|229046689\|ref\|ZP_04192336.1\| Pyrroline-5-carboxylate reductase [Bacillus cereus AH676], gi\|228724... gi\|228637821, gi... - gi\|229145575\|ref\|ZP_04273958.1\| Pyrroline-5-carboxylate reductase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228655178, gi... - gi\|229128319\|ref\|ZP_04257300.1\| Pyrroline-5-carboxylate reductase [Bacillus cereus BDRD-Cer4], gi\|22... gi\|228672919, gi... - gi\|229110435\|ref\|ZP_04240005.1\| Pyrroline-5-carboxylate reductase [Bacillus cereus Rock1-15], gi\|228... gi\|29896645, gi\|... - gi\|30021092\|ref\|NP_832723.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 14579], gi\|2989...	5.0E-50	[1..272]	[1..272]

Back

Predicted Domain #1

Region A:
Residues: [1-272]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKQIGFIGC GNMGMAIIGG MLNKKIVSSN KIMCSDLNTT NLENASEKYG ISITTDNNEV  60
   61 AKNADILILS IKPDLYASVI NEIKEEIKSD VIVVTIAAGK SVKSTEDSFD TKLKVVRVMP 120
  121 NTPALVGEGM SALCPNEMVT EKDLEDVLNI FNSFGQSEIV SEKLMDVVTS VSGSSPAYVY 180
  181 MIIEAMADAA VLDGMPRNQA YKFAAQAVLG SAKMVLETGI HPGELKDMVC SPGGTTIEAV 240
  241 ATLEEKGLRT AIISAMQRCT QKSVELSGQT KK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.39794
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits