YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|167634078, gi...
Organism:	Bacillus anthracis str. A0442
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167634078, gi....

Description	E-value	Query Range	Subject Range
gi\|20808973, gi\|... - gi\|20808973\|ref\|NP_624144.1\| hypothetical protein TTE2628 [Thermoanaerobacter tengcongensis MB4], gi... gi\|20808973 - gi\|20808973\|ref\|NP_624144.1\| uncharacterized ACR, predicted metal-dependent hydrolase [Thermoanaerob...	2.0E-65	[1..209]	[1..209]
gi\|89204741, gi\|... - gi\|89204741\|ref\|ZP_01183317.1\| Putative cyclase [Bacillus weihenstephanensis KBAB4], gi\|89157368\|gb\|...	5.0E-63	[1..210]	[1..210]
gi\|42735457, gi\|... - gi\|42779541\|ref\|NP_976788.1\| hypothetical protein BCE_0461 [Bacillus cereus ATCC 10987], gi\|42735457...	1.0E-62	[1..210]	[1..210]
gi\|52144887, gi\|... - gi\|52144887\|ref\|YP_081941.1\| cyclase [Bacillus cereus E33L], gi\|51978356\|gb\|AAU19906.1\| conserved hy... gi\|49331606, gi\|... - gi\|49480050\|ref\|YP_034679.1\| cyclase [Bacillus thuringiensis serovar konkukian str. 97-27], gi\|49331...	1.0E-62	[1..210]	[1..210]
gi\|47569419, gi\|... - gi\|47569419\|ref\|ZP_00240101.1\| metal-dependent hydrolase [Bacillus cereus G9241], gi\|47553927\|gb\|EAL...	1.0E-62	[1..210]	[26..235]
gi\|65317786 - gi\|65317786\|ref\|ZP_00390745.1\| COG1878: Predicted metal-dependent hydrolase [Bacillus anthracis str....	6.0E-62	[1..210]	[18..227]
gi\|30018603, gi\|... - gi\|30018603\|ref\|NP_830234.1\| metal-dependent hydrolase [Bacillus cereus ATCC 14579], gi\|29894144\|gb\|...	1.0E-61	[1..210]	[1..210]
gi\|28211473, gi\|... - gi\|28211473\|ref\|NP_782417.1\| hypothetical protein CTC01833 [Clostridium tetani E88], gi\|28203914\|gb\|...	5.0E-59	[1..209]	[1..210]
gi\|89200021, gi\|... - gi\|89200021\|ref\|ZP_01178777.1\| Putative cyclase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|89...	5.0E-58	[1..204]	[1..204]
gi\|21648316, gi\|... - gi\|21675076\|ref\|NP_663141.1\| hypothetical protein CT2269 [Chlorobium tepidum TLS], gi\|21648316\|gb\|AA...	8.0E-56	[1..209]	[1..211]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVIDLSQTF ENNMSQFPGT PKINLEAITS VEETGYQVTD FHSVVHVGTH CDAPAHFISG  60
   61 ATTIDQLPLD QFVGEAVLID VTHVQERKLR KEVLHNADIK EGDIVIFHSN LSTKWNTEAY 120
  121 EQEAFYLSEE LAEELVQLKV KSVGLDFISP DEVTTETSPI HHILLGNNIY LIENLTNLDA 180
  181 IKTKRFFFSA APLKIKDSDG AFARAFAVIF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.0
Match:	1r61A
Description:	The structure of predicted metal-dependent hydrolase from Bacillus stearothermophilus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.735352182450617	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: