| Protein: | gi|165871228, gi... |
| Organism: | Bacillus anthracis str. A0488 |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|165871228, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..687] |
|
|
0.0 | [1..687] | [1..697] |
|
|
0.0 | [1..663] | [1..657] |
|
|
0.0 | [1..687] | [1..701] |
|
|
0.0 | [1..687] | [1..698] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MFKKIFGVLQ KVGKALMLPV AILPAAGILL GFGNAFQNPQ LTNVIPALKA DWFVMVAKIM 60
61 EQSGDIIFAN LALLFAVGVA IGLAGGDGVA GLAAFVGYLI MNKTMSVFLE VDKLVKVTSS 120
121 GADPVKIGFT DPAYANVLGI PTLQTGVFGG IIVGIVAAYC YNKYFNIE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-279] |
1 11 21 31 41 51
| | | | | |
1 LPSYLGFFAG KRFVPIATAT FSLVVGIIMC FVWPYIQGGL NTFSHQMIDA NRTLAAFIFG 60
61 LIERSLIPFG LHHIFYSPFW FEFGQYTNAA GELIRGDQKI FMAQLKDGVE L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [280-425] |
1 11 21 31 41 51
| | | | | |
1 TAGTFTTGKY PFMMFGLPAA ALAMYHEARP ENKKLAAGIL GSAALTSFLT GITEPLEFSF 60
61 LFVAPVLFGI HAVFAGLSFM TMQILGVKIG MTFSGGLIDF MLFGVLPGRT AWWWVIVVGL 120
121 VLAVIYYFGF RFAIRKWNLK TPGREV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [426-519] |
1 11 21 31 41 51
| | | | | |
1 ANANDGAGKA EAGELPREVL VALGGKENIA SLDACITRLR VQVNEQKNVN KDRLKELGAA 60
61 GVLEVGNNIQ AIFGPKSDTL KSQIHDIMSG RTPH
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1o2fB |
| Description: | Glucose permease domain IIB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.31090449546064 | bayes_pls_golite062009 |
| protein binding | 0.476896736636797 | bayes_pls_golite062009 |
|
Region A: Residues: [520-687] |
1 11 21 31 41 51
| | | | | |
1 VEKEEPVKVE EALQKVDANE TIVSPIEGKI LPITEVPDQV FSGKMMGDGF AIEPTEGTVV 60
61 SPVNGEIVNV FPTKHAIGIQ SEGGKEILIH FGIDTVKLNG EGFEALVAQG DKVKQGQPLL 120
121 KVDLAFVKEN APSIITPIVF TNLQQGQQVE LKKDGNVKKG ENAIIDIQ
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | 1ax3A |
| Description: | SOLUTION NMR STRUCTURE OF B. SUBTILIS IIAGLC, 16 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| carbohydrate transmembrane transporter activity | 2.13836390376928 | bayes_pls_golite062009 |
| binding | 1.28730362877885 | bayes_pls_golite062009 |
| transporter activity | 0.711149297585691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.517650155593165 | bayes_pls_golite062009 |
| protein binding | 0.445041376423941 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.276105437109391 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.243355624712309 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.113736784801445 | bayes_pls_golite062009 |
