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View Structure Prediction Details

Protein: gi|220955280, gi...
Organism: synthetic construct
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220955280, gi....

Description E-value Query
Range
Subject
Range
gi|7511926, gi|2... - pir||T13607 hypothetical protein 87B1.3 - fruit fly (Drosophila melanogaster), gi|2326408|emb|CAB10...
452.0 [0..1] [533..1]

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Predicted Domain #1
Region A:
Residues: [1-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFQQLLHVR RLASAGATTL MRRPITTTTI TTTSRTALAA TYPAFATTVR TMAGSGAPIP  60
   61 ELTEITDNVQ RGNYATLTDK DVAHFEQLLG KNFVLTEDLE GYNICFLKRI RGNSKLVLKP 120
  121 GSTAEVAAIL KYCNERRLAV VPQGGNTGLV GGSVPICDEI VLSLARLNKV LSVDEVTGIA 180
  181 VVEAGCILEN FDQRAREVGL TVPLDLGAKA SCHIGGNVST NAGGVRVVRY GNLHGSVLGV 240
  241 EAVLATGQVL DLMSNFKKDN TGYHMKHLFI GSEGTLGVVT KLSMLCPHSS RAVNVAFIGL 300
  301 NSFDDVLKTF VSAKRNLGEI LSSCELIDER ALNTALEQFK FLNSPISGFP FYMLIETSGS 360
  361 NGDHDEEKIN QFIGDGMERG EIQDGTVTGD PGKVQEIWKI REMVPLGLIE KSFCFKYDIS 420
  421 LPLRDFYNIV DVMRERCGPL ATVVCGYGHL GDSNLHLNVS CEEFNGEIYK RVEPFVYEYT 480
  481 SKLKGSISAE HGIGFLKKDY LHYSKDPVAI GYMREMKKLL DPNSILNPYK VLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.154902
Match: 2uuuA
Description: No description for 2uuuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle