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View Structure Prediction Details

Protein: gi|220945708, gi...
Organism: synthetic construct
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220945708, gi....

Description E-value Query
Range
Subject
Range
FBpp0301703, FBp... - This gene is referred to in FlyBase by the symbol Dmel\CG12207 (CG12207, FBgn0038220). It is a prote...
gi|220950506 - gi|220950506|gb|ACL87796.1| CG12207-PA [synthetic construct]
180.0 [0..32] [366..9]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYIVKAYKD WKLHSQFQEI VPDMDDSEFM FNEKQSIRDS GRTLKRYGST CCNSLRNNET  60
   61 LIRHIVEKTD TLQGIALKYG CTTEQIRRAN RLFASDSLFL RQFLLVPVEK NSPYYPQVPG 120
  121 DSIAAFDAVL ATPPGTPDAN GQREAHNNAN NLSQSNKSFM K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2djpA
Description: No description for 2djpA was found.

Predicted Domain #2
Region A:
Residues: [162-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNDISSSSSS SSSGSSSSCN TSGTGPISGG SRSGGNQQQQ QQQPPQRPYS IAGELLVVQA  60
   61 GDEDPSMMHG HGGCSGKQSK SLDSVAAMTP EEENRKCMND FLNKIDNTIS E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRKYVERSKD LVSSQSDADI CISATADVFP QRRHPLNNSY KTNNNDRPSQ YQRHSSTGSG  60
   61 NSSDTAHLLN TTQTRRVQNS LKRLEKQQDD FFEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.09691
Match: 2evrA
Description: Crystal structure of (53686717) from Nostoc punctiforme PCC 73102 at 1.60 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.529663942126259 bayes_pls_golite062009
hydrolase activity 0.16837900182603 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle