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View Structure Prediction Details

Protein: gi|220958172, gi...
Organism: synthetic construct
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220958172, gi....

Description E-value Query
Range
Subject
Range
gi|114557924 - gi|114557924|ref|XP_513572.2| PREDICTED: estrogen receptor binding protein [Pan troglodytes]
230.0 [0..84] [266..892]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSIFLVDTT GRQEFNGEQQ QKKIVYNKEL LLTESDAHSE EDEEQNEGAV ELFGLKLNSK  60
   61 EVLDVVNSLP DRKKPVSKVA KQLEDLCEKV ESAVENSSKP KVVPRKRVTE LNHDAPHLDL 120
  121 RQENLESNMK RTKQALNP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLEQAHALPT VGKRQQPIIN RAERSKTKGK GWFNLPATEI TDEMRNELKI VQMRSVLNPK  60
   61 QFYKKNDLKS LPKFFQIGTV LPSHLDHYQE KKSKKKQSLV NELLEDESFQ KFNKRKFNEV 120
  121 IKRTDKYAYR KNLKKMKKLK KNK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.79588
Match: PF08698.2
Description: No description for PF08698.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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