| Protein: | gi|220951884 |
| Organism: | synthetic construct |
| Length: | 710 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220951884.
| Description | E-value | Query Range |
Subject Range |
|
|
944.0 | [0..1] | [709..1] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MSGARDQTDP PLLQLEDEVD LIGDFAKDQP PPRNQLSPLL NGFESTSNQL TTKVEINTVG 60
61 MGKRKTRRRG KKAREPMLLS VDDEDDEEEA QEERNHTNGL PPGEESAGGD AVIQKPQLDN 120
121 LVMHYDDQID DEDGEEAVLL KRSSNPRNQR LKGSAEDSID SSSQQPPIIC HIAPAKVASS 180
181 ALTSPLKTTS HTALARHPHD EADDICLVPE IDFEGMSTDA GSDNRESQPL LGGGNASHGS 240
241 RISELLGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [249-377] |
1 11 21 31 41 51
| | | | | |
1 LGRGHDHVEF VSNTFGDDPL FSEIVAKAEG AIENGVLPER IYQGSSGSYF VKDASHQCLA 60
61 VFKPKDEEPY GRLNPKWTKW MHKLCCPCCF GRACLIPNQG YLSESGASLV DRKLNLNVVP 120
121 KTRVVRLVA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [378-529] |
1 11 21 31 41 51
| | | | | |
1 ESFNYARIDR QKAKLKKRIK EHYPSAHFNR MSLPLKTGSF QLFVEGYKDA DYWLRRFESE 60
61 PLPPSVAKSF QLQFERLVVL DYIIRNTDRG NDNWLIKYVA PKITTQVGGT GGRTMHGVVT 120
121 PKLPNALGAS KIVDLNEPPQ ASPKPTTGGR PS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.530 | 0.052 | membrane raft | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.489 | 0.032 | membrane raft | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.217 | 0.021 | membrane raft | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.350 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.218 | N/A | N/A | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
|
Region A: Residues: [530-710] |
1 11 21 31 41 51
| | | | | |
1 NHLAGGAATS AQQDSSSLAS SEDEPSSRSP PTSEPDWNVV NSAFIRIAAI DNGLAFPFKH 60
61 PDSWRAYPYH WAWLPQAKIP FSEEIKEQVL PQLSDMNFVE EICTELLYLF QQDRGFDKRL 120
121 FERQMSVMRG QILNLTQALR DGKSPVQLVQ MPAVIVERSS GSRFFSFTQR FQNKSPFFSW 180
181 C
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
