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View Structure Prediction Details

Protein: gi|221233206, gi...
Organism: Caulobacter crescentus NA1000
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221233206, gi....

Description E-value Query
Range
Subject
Range
gi|113729214, gi... - gi|167648531|ref|YP_001686194.1| NUDIX hydrolase [Caulobacter sp. K31], gi|167350961|gb|ABZ73696.1| ...
234.0 [0..1] [313..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSIITNTF AGNPLDRDSE RRGDEAFLAE KLADPESLAV ALWNGKPLVE DILGEDGKPT  60
   61 GVQIAYLRAD MAQDLAGGSE KLLYMGLWKD IAVFAVDIEG AADPAEGPLQ GLGRFEELRG 120
  121 AAASMPPADA GILATAKSMF EWRRRHRWCS ACGQKTEVSD GGWKRVCPSC EAEHFPRTDP 180
  181 VAIMLAIHDG KCLLGRQAMW PQGMFSALAG FIEPGETIEE ACARELQEEA GLKATAVRYH 240
  241 SSQPWPWPSS LMMGLIAEVD SDEAAPDQTE LEEVRWFTRE EALQLIRGEL DGLFAPPPLA 300
  301 IAHQLIKAWA EEA

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Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 1vk6A
Description: Crystal structure of NADH pyrophosphatase (1790429) from Escherichia coli k12 at 2.20 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle