| Protein: | gi|220956874, gi... |
| Organism: | synthetic construct |
| Length: | 1191 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220956874, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
1062.0 | [0..1] | [1191..1] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MSSGQQLMAD SPACSSSDHS PLAKKRRLEL LGDGVGAMGM EEEEAGGATS SSSSNNYENH 60
61 DKAGGVDISG KCQSKTTSEH QLELCVSSST SDTCGVNAAA KRAEKQKLKQ SQGSGDDVST 120
121 SSAVEKEGSK RPEKRNYLNT TTIESQEASS SASATSNSNN NVSSSNNNSN NSTNNRQLEG 180
181 SSNMAGNSAA A
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-576] |
1 11 21 31 41 51
| | | | | |
1 GGDIDESLYS RQLYVLGHDA MRRMANSDIL LSGLGGLGLE IAKNVILGGV KSITLHDTAT 60
61 CGLHDLSSQF YLTEADIGKN RAEASCAQLA ELNNYVRTVS HTGPLTEEFL RKFRVVVLTN 120
121 SDGEEQQRIA KFAHENGIAL IIAETRGLFA KVFCDFGESF TIYDQDGTQP ISTMIASITH 180
181 DAQGVVTCLD ETRHGFNDGD YVTFSEVQGM QELNGCQPLK ITVLGPYTFS IGDTSKFGEY 240
241 KSGGVATQVK MPKTISFKPL AQATEEPEFL ISDFAKLDSP ATLHVAFNAL SCYRKAHNGA 300
301 LPRPWNEEDA NSFLEVVRAS SNAEVDEKLV LQFAKICSGN TCPLDAAVGG IVAQEVLKAC 360
361 SGKFTPIYQW LYFDALECLP TEGVE
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 1y8qA |
| Description: | SUMO E1 ACTIVATING ENZYME SAE1-SAE2-MG-ATP COMPLEX |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-982] |
1 11 21 31 41 51
| | | | | |
1 EADAQPVGSR YDSQIAIFGK KFQEKLADSK WFIVGAGAIG CELLKNFGML GLGTGNGQIF 60
61 VTDMDLIEKS NLNRQFLFRP HDVQKPKSMT AADAIKRMNP EVNVTAYELR VGAETEKVFS 120
121 EDFFGKLDGV ANALDNVDAR IYMDRKCIFN RIPLVETGTL GTLGNVQVIV PFATESYSSS 180
181 QDPPEKSIPI CTLKNFPNAI EHTLQWARDA FEGVFKQSAE NAAQYIADPQ FTERIAKLPG 240
241 IQPLEILDSI KKALIDDKPK SFAHCVEWAR LYWEDQYVNQ IKQLLFNFPP DQITSSGQPF 300
301 WSGPKRCPDP LVFDVNDPMH LDFIYAAANL RAEVYGIEQV RNRETIAELV QKVKVPEFKP 360
361 RSGVKIETNE AAAAASANNF DDGELDQDRV DKIISELLKN ADKSSK
|
| Detection Method: | |
| Confidence: | 60.221849 |
| Match: | 2nvuB |
| Description: | No description for 2nvuB was found. |
|
Region A: Residues: [983-1075] |
1 11 21 31 41 51
| | | | | |
1 ITPLEFEKDD DSNLHMDFIV ACSNLRAANY KIPPADRHKS KLIAGKIIPA IATTTSVLSG 60
61 LAVLEVIKLI VGHRDLVKFK NGFANLALPF MAF
|
| Detection Method: | |
| Confidence: | 70.0 |
| Match: | 1z7lA |
| Description: | Crystal structure of fragment of mouse ubiquitin-activating enzyme |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1076-1191] |
1 11 21 31 41 51
| | | | | |
1 SEPLPAAKNT YYGKEWTLWD RFEVTGELSL QEFLNYFEEN EKLKITMLSQ GVSMLYSFFM 60
61 PKAKCSERLP LPMSEVVRRV SKRRLEPHER SLVFEICCND VDGEDVEVPY VRYTLP
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1y8xB |
| Description: | Structural basis for recruitment of Ubc12 by an E2-binding domain in NEDD8's E1 |
Matching Structure (courtesy of the PDB): |
|
