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View Structure Prediction Details

Protein: gi|221233977, gi...
Organism: Caulobacter crescentus NA1000
Length: 546 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221233977, gi....

Description E-value Query
Range
Subject
Range
gi|67865030, gi|... - gi|67927856|ref|ZP_00521047.1| Alpha-L-arabinofuranosidase [Solibacter usitatus Ellin6076], gi|67865...
448.0 [0..5] [543..13]

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Predicted Domain #1
Region A:
Residues: [1-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDLIRNPV LRGFNPDPSI VRVGEDYYIA TSTFEWFPGV QIHHSRDLRN WRLIGRPLRR  60
   61 PSQLNMMGDP DGCGVWAPCL THADGRFWLI FTDVKRYGRT TVGGASGASL RDFHNYLVTC 120
  121 ETIDGDWSDP IHLNSSGFDP SLFHDDDGRK WLVNQLWDHR PGRNRFAGIV LQAFSVAEQR 180
  181 LVGERKVIFE GTAIGLTEAP HLYKRDGWYY LLTAEGGTGW GHAATLARSR AIDGPYELHP 240
  241 DTYLLTARDR PHAPLQRAGH GDLFETADGE TYIAYLCGRP LPGRGRCVLG RETAIQKLTW 300
  301 GADGWPRTLD GSGDPTLETP GAGLVDQPWP TTPVREDFDG TTLPIDFQWL RTPYPETIFS 360
  361 LTARPGFLRL YGRESLGSVF TQALVARRQQ AHCYSAATRL DFEPAHFQQA AGLVCYYNGS 420
  421 KLHYLHVTHD DEAGKHLRVM TCTPDSPQAD SFTAPIPLGA GPVDLRVEVD FERLRFGFRQ 480
  481 AGGDWRWLPE VFDASILSDE ATAPGAPNFT GAFVGMACQD MSGMATAADF DWFDYQERDY 540
  541 VAQWPA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 1yrzA
Description: Crystal structure of xylan beta-1,4-xylosidase from Bacillus Halodurans C-125
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle