| Protein: | gi|220944468, gi... |
| Organism: | synthetic construct |
| Length: | 281 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220944468, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
181.0 | [0..5] | [275..209] |
|
|
179.0 | [0..1] | [275..8] |
|
|
178.0 | [0..2] | [275..9] |
|
|
174.0 | [0..1] | [281..26] |
|
|
171.0 | [0..2] | [275..9] |
|
|
169.0 | [0..2] | [275..8] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MEKNKYVPRV NQIDAIYLNK DIARLIRDNL LENLQAISPV LFIKIQPELD LIIQSAIWFG 60
61 SVGKRCSTFG QQLLVLAYDA EKLTVSRLVL HFILTVLPGY VKSWEERRLT RRVEWFSEAI 120
121 MWVENSALIL NILNYFRFLK T
|
| Detection Method: |  |
| Confidence: | 6.619789 |
| Match: | PF04757.5 |
| Description: | No description for PF04757.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-281] |
1 11 21 31 41 51
| | | | | |
1 GRKPTLVDYL LGLDYISLRN NQRRDIGYKY LTRELLWGGF MEILGLVLPI INFRKLQRVL 60
61 KSWTFSGRRL EDRDGPAFLA PQMTLSTTCT FCGERPTLPH HMGCGHIYCY YCLNANVLTD 120
121 ASFCCPNCGS ACPESGIQSV
|
| Detection Method: | |
| Confidence: | 3.154902 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peroxisome targeting sequence binding | 5.59105468633314 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-1 binding | 4.32924705221769 | bayes_pls_golite062009 |
| binding | 2.09193012129784 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| signal transducer activity | 0.588696566907921 | bayes_pls_golite062009 |
| molecular transducer activity | 0.588696566907921 | bayes_pls_golite062009 |
| receptor activity | 0.286950097751614 | bayes_pls_golite062009 |
