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View Structure Prediction Details

Protein: gi|220947962
Organism: synthetic construct
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220947962.

Description E-value Query
Range
Subject
Range
gi|28921166, gi|... - gi|32421457|ref|XP_331172.1| hypothetical protein [Neurospora crassa], gi|28921166|gb|EAA30480.1| au...
gi|85093549 - gi|85093549|ref|XP_959716.1| augmenter of liver regeneration [Neurospora crassa OR74A]
232.0 [0..2] [193..10]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEANPEMD KEHHESPFAA NRKAGASGAG KQDSNCRTCN DFKSWSKQQR LISNVQSAKV  60
   61 KHMAAAEKLT VNAAEDPLPR DDCPLDKVRL GISTWGLLHT MAAFYSDNPT DTEKRDMKTF 120
  121 FEVLSRLYPC EFCAKDFRTD LDVNPINVNS QKELALWLCK FHNRVNDKLG KPLFDCTKVN 180
  181 ERWRDGWLDG SCD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.30103
Match: 1oqcA
Description: Augmenter of liver regeneration
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors, oxygen as acceptor 8.87150227689427 bayes_pls_golite062009
thiol oxidase activity 8.35075284009652 bayes_pls_golite062009
flavin-linked sulfhydryl oxidase activity 3.45360739809667 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 2.80346464149611 bayes_pls_golite062009
binding 1.31466847278576 bayes_pls_golite062009
protein binding 0.425029114798138 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle