| Protein: | gi|220954630, gi... |
| Organism: | synthetic construct |
| Length: | 299 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220954630, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
267.0 | [0..1] | [297..1] |
|
|
263.0 | [0..1] | [297..1] |
|
|
262.0 | [0..1] | [297..1] |
|
|
261.0 | [0..1] | [297..1] |
|
|
261.0 | [0..1] | [297..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MGCDGGTIPR RDELVRVKQK PEQKDKDAER EFRWRHCTLT QQSLQEPIAM CGMGRLYSKQ 60
61 SVIERLLEKE PMPETAAHVK SMKD
|
| Detection Method: |  |
| Confidence: | 1.19 |
| Match: | 1wgmA |
| Description: | Solution structure of the U-box in human ubiquitin conjugation factor E4A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.60928341417249 | bayes_pls_golite062009 |
| protein binding | 1.13053895005339 | bayes_pls_golite062009 |
|
Region A: Residues: [85-209] |
1 11 21 31 41 51
| | | | | |
1 IRQLNPTPNP AFTEEDKTEG LLDTRHSPYI CKLIGLEMSG KFRFVALWSC GCVLSERALK 60
61 QIKGSVASTC PLCQAAYSVE DVVVLNGNEE DMELMRVKME MRAAKRKSSK KDKKSAKKVE 120
121 VKAEP
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [210-299] |
1 11 21 31 41 51
| | | | | |
1 AEEQEPVAST SKAAAAEKPT TSTKTKAVAP VKRLGAVNAM QDPELKRLKS DFSVAKDPKA 60
61 SDVYKSLFTS HKTEKDQERA HWVTYNPFYN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
