| Protein: | gi|220943012 |
| Organism: | synthetic construct |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220943012.
| Description | E-value | Query Range |
Subject Range |
|
|
565.0 | [0..92] | [563..2386] |
|
Region A: Residues: [1-192] |
1 11 21 31 41 51
| | | | | |
1 MESVAQQLRE LSLPKGDTGS PLVCIGHGKV AKLVAKISNN QNASVKRRLD IPPKPPIKYN 60
61 EMPQVPSSRQ VLCSREPLYS QPLIGVEKTM RGHMPFRKYL SSEFGVADTQ INRKTTLDNP 120
121 AILEQQLEAL AYHKLQMEKK GLLGVQAKPT QPLNSFTKPL SKTLSKSLIY SNLGSVRKEI 180
181 ETLELLTDET KI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [193-334] |
1 11 21 31 41 51
| | | | | |
1 SASTYSNVNE TDNEKDELPP PPSPESAVSS SYSELRHATL EFNKPIDYLQ NNQTTNPLQI 60
61 YANQYAMQHD ATGKSSSTYD SIYEPINPRP CVADTLPRES YNLHNSYVND NNPNISHEYN 120
121 ISNSIEANQT LYIHGNARTT FY
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1meyC |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [335-564] |
1 11 21 31 41 51
| | | | | |
1 DVNSIHRNDK EGLKNYISIP TEPVQELENY GRCVKCNSRV LGESSGCTAM DQIYHIFCFT 60
61 CTDCQINLQG KPFYALDGKP YCEYDYLQTL EKCSVCMEPI LERILRATGK PYHPQCFTCV 120
121 VCGKSLDGLL FTVDATNQNY CITDFHKKFA PRCCVCKQPI MPDPGQEETI RVVALDRSFH 180
181 LECYKCEDCG LLLSSEAEGR GCYPLDDHVL CKSCNAKRVQ ALTNRMTSEH
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
