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View Structure Prediction Details

Protein: gi|220943038
Organism: synthetic construct
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220943038.

Description E-value Query
Range
Subject
Range
CLP1_DROPS - Protein CLP1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=cbc PE=3 SV=1
gi|54636126, gi|... - gi|54636126|gb|EAL25529.1| GA19268 [Drosophila pseudoobscura pseudoobscura], gi|125809011|ref|XP_001...
409.0 [0..1] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDQGKDYT LESDSELRFE IEQKDAKVLV SLVSGFAELF GTELVKKKQY EFGVGAKVAI  60
   61 FTYQGCVLHV SGKMDVCYIS KETPMVQYVN CHAALEQFRM EAEEKDRYGP VAMVVGPMDV 120
  121 GKSTLCRILL NYAVRVGRRP LYADLDVGQG SIAISGSVAT ILIERPANVE EGFAKTAPLV 180
  181 YHFGHKSPSG NSVLYNAVVS KMAEVTLQSL NSNKRTKSSG IIINTCGWVK GSGYAHLLHA 240
  241 AKAYGACAIF VLDQERLYNE LLRDVPKGVH VVLLPKSGGV VERSKELRHE ARDQRIKEYF 300
  301 YGNTRAPFYP FSFEVKFQDL RLYKIGAPPL PDSCMPIGMK AEDNKTKVVA VTPTPALIHH 360
  361 VLALSFAESV EDDVIGTNVA GFCCVTEVDM ERQAVMLLSP QPRPLPPNAL LLWSELQFMD 420
  421 NHT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 2npiA
Description: No description for 2npiA was found.

YRC Informatics Platform - Version 3.0
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