YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|220945188, gi...
Organism:	synthetic construct
Length:	224 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220945188, gi....

Description	E-value	Query Range	Subject Range
GstE3-PA - The gene Glutathione S transferase E3 is referred to in FlyBase by the symbol Dmel\GstE3 (CG17524, F...	186.0	[0..4]	[218..2]
gi\|54636482, gi\|... - gi\|54636482\|gb\|EAL25885.1\| GA18748-PA [Drosophila pseudoobscura], gi\|125809983\|ref\|XP_001361308.1\| G...	182.0	[0..1]	[224..1]
GSTF3_MAIZE - Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4	180.0	[0..1]	[205..1]
gi\|11385465 - gi\|11385465\|gb\|AAG34815.1\|AF243380_1 glutathione S-transferase GST 25 [Glycine max]	177.0	[0..1]	[211..1]

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Predicted Domain #1

Region A:
Residues: [1-224]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSGIVLYG TDLSPCVRTV KLTLKVLNLD YEYKEVNLQA GEHLSEEYVK KNPQHTVPML  60
   61 DDNGTFIWDS HAIAAYLVDK YAKSDELYPK DLAKRAIVNQ RLFFDASVIY ASIANVSRPF 120
  121 WINGVTEVPQ EKLDAVHQGL KLLETFLGNS PYLAGDSLTL ADLSTGPTVS AVPAAVDIDP 180
  181 ATYPKVTAWL DRLNKLPYYK EINEAPAQSY VAFLRSKWTK LGDK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.221849
Match:	2il3A
Description:	No description for 2il3A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits