YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|220947532, gi...
Organism: synthetic construct
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220947532, gi....

Description E-value Query
Range
Subject
Range
gi|54643254, gi|... - gi|54643254|gb|EAL31998.1| GA21888-PA [Drosophila pseudoobscura], gi|125981877|ref|XP_001354942.1| G...
394.0 [0..4] [271..2]

Back

Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEECFVPR LPVDSEFIQF HDWAIKYEKS HILKSSCQLG TAKCCPKDSA DRCDLCHYQH  60
   61 SLQLPHLPDM VFHKNRLVLQ HKDGATLEFC PMDALALVDN GKQPLEVACA QEWRETRNEQ 120
  121 TMEEKFKPFD WTFTSTYQGT MNEKVRSETT NQTLNKFKLM QRENIIFYHD LTLFEDELHD 180
  181 HGISVMSVRI RVMPSGFFIL LRHFLRVDHV LIRMHDTRFH HEIENDFILK EYIHREAPCT 240
  241 ELQNCVAFWT NPDEMQEFVP VKSKQLHKLF FK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 125.075721
Match: PF04176.4
Description: No description for PF04176.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle