| Protein: | gi|220947552 |
| Organism: | synthetic construct |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220947552.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..95] | [605..1] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MTAAKRRASS SNSSGSSNTS GSSNGNEQHS QQQHLQLQQQ QQQHAQPNEY QQLLQHPHHH 60
61 YQQHYSGNNN TSGNNSNSSN TQQYHQRQQQ HQATLRDCSV KLPLDILWLP KSAMRPAGPD 120
121 TSPTDCILVV GVSRPKLAVV FLTVMLISLF LTFHVLYDSA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [161-415] |
1 11 21 31 41 51
| | | | | |
1 VYNIQAAQAV HERHRLSMTA SASALASSSS SSSNSGSSFS SAGGASNHLP VFVKPVPSSN 60
61 QLSHPMVFPS SRVHFPKTSR RLPQALIIGV RKCGTRALLE MLYLHPRIQK AGGEVHFFDR 120
121 DENYLKGLEW YRKKMPHSFR GQITIEKSPS YFVSPEVPER VRAMNASIKL LLIVREPVTR 180
181 AISDYTQLRS HAATAILPLA EKDPPSPRES SGGGAGGGGA GGGGGSGTAA AKMPTQSLLY 240
241 AKLQSARGYD NALLG
|
| Detection Method: | |
| Confidence: | 36.69897 |
| Match: | 1nstA |
| Description: | Heparan sulfate N-deacetylase/N-sulfotransferase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [416-605] |
1 11 21 31 41 51
| | | | | |
1 GSGAGAKETK GKTVSSSLVR RQALGSGGGV AGAAMTTTTM SPMASAAQMA AKSFEELAIF 60
61 PNGTVNEAYR PLSISMYHVH LHRWLEVFPR EQLLVVNGDR LIEDPVSQLK RIEAFLGIEH 120
121 RVNSEHFYFN ETKGFYCLRY DNGDRCLRET KGRKHPHVDP VVVSRLRKFF AEYNQRFYEL 180
181 VGEDLGWPEE
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 1t8uA |
| Description: | Crystal Structure of human 3-O-Sulfotransferase-3 with bound PAP and tetrasaccharide substrate |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
