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View Structure Prediction Details

Protein: gi|220957970, gi...
Organism: synthetic construct
Length: 89 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220957970, gi....

Description E-value Query
Range		 Subject
Range
gi|125979515|ref... - GA20453-PA [Drosophila pseudoobscura], GA20453 [Drosophila pseudoobscura pseudoobscura]
gi|125979515, gi... - gi|54640773|gb|EAL29524.1| GA20453 [Drosophila pseudoobscura pseudoobscura], gi|125979515|ref|XP_001...
 137.0 [0..1] [89..1]
gi|73971160 - gi|73971160|ref|XP_852164.1| PREDICTED: similar to low molecular mass ubiquinone-binding protein [Ca...
 133.0 [0..8] [89..1]
QCR8_AILME - Cytochrome b-c1 complex subunit 8 OS=Ailuropoda melanoleuca GN=UQCRQ PE=3 SV=3
 132.0 [0..8] [89..1]
QCR8_BOVIN - Cytochrome b-c1 complex subunit 8 OS=Bos taurus GN=UQCRQ PE=1 SV=3
 132.0 [0..8] [89..1]
QCR8_MOUSE - Cytochrome b-c1 complex subunit 8 OS=Mus musculus GN=Uqcrq PE=1 SV=3
 130.0 [0..8] [89..1]
gi|50755204 - gi|50755204|ref|XP_414651.1| PREDICTED: similar to GekBS039P isoform 2 [Gallus gallus]
 129.0 [0..8] [89..36]
QCR8_RAT - Cytochrome b-c1 complex subunit 8 OS=Rattus norvegicus GN=Uqcrq PE=3 SV=1
 129.0 [0..8] [89..1]
UQCRQ - ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa
gi|114601624, gi... - gi|114601626|ref|XP_527009.2| PREDICTED: ubiquinol-cytochrome c reductase, complex III subunit VII i...
 129.0 [0..8] [89..1]
CE04818 - status:Confirmed UniProt:Q21817 protein_id:AAA80402.1
 129.0 [0..1] [89..1]

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Predicted Domain #1
Region A:
Residues: [1-89] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSSILNGQ HFGNLAKVHG IVTYKLSPFE QRAFAGAISK GLPNMVRRFR SNVFIVTPPF  60
   61 IVGYLIYDLT ERKHTALLRK NPADYANDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 1be3G
Description: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ubiquinol-cytochrome-c reductase activity 11.4657297014599 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 11.4657297014599 bayes_pls_golite062009
ubiquinone binding 8.14330726546719 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors 8.07004376323578 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 5.53710572481351 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 5.38577566963514 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.79259194111116 bayes_pls_golite062009
oxidoreductase activity 4.78909275746755 bayes_pls_golite062009
cation transmembrane transporter activity 4.5536689474984 bayes_pls_golite062009
ion transmembrane transporter activity 4.36122531415799 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.96296151827022 bayes_pls_golite062009
substrate-specific transporter activity 3.77517262558965 bayes_pls_golite062009
quinone binding 2.82234066289866 bayes_pls_golite062009
binding 1.3775057351058 bayes_pls_golite062009
cofactor binding 0.937113949001792 bayes_pls_golite062009
catalytic activity 0.442357802307605 bayes_pls_golite062009
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