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View Structure Prediction Details

Protein: gi|220957912, gi...
Organism: synthetic construct
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220957912, gi....

Description E-value Query
Range
Subject
Range
gi|28317249 - gi|28317249|gb|AAL68169.2| AT31406p [Drosophila melanogaster]
206.0 [0..1] [163..2]
gi|39589189, gi|... - gi|39589189|emb|CAE57922.1| Hypothetical protein CBG00975 [Caenorhabditis briggsae], gi|187038635|em...
gi|157748913 - gi|157748913|ref|XP_001678170.1| Hypothetical protein CBG00975 [Caenorhabditis briggsae AF16]
130.0 [0..3] [118..333]
gi|125986849, gi... - gi|54645517|gb|EAL34255.1| GA12683-PA [Drosophila pseudoobscura], gi|125986849|ref|XP_001357187.1| G...
120.0 [0..5] [163..1]
CE01739 - status:Confirmed UniProt:Q09384 protein_id:CAA88441.1
114.0 [0..25] [117..6]
gi|108876369, gi... - gi|157116634|ref|XP_001658586.1| hypothetical protein AaeL_AAEL007679 [Aedes aegypti], gi|108876369|...
109.0 [0..12] [130..18]
gi|94418441, gi|... - gi|94418441|ref|XP_001003200.1| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) ...
106.0 [0..41] [135..4]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHKQSTNNE TSNGSTTEII DETDARAQLE SGRTTPTLLL RLEHPRNERR VAFHAGIIDN  60
   61 EHLNRKKSKC CCIYKKPLAF GESSSEDDED CEHCFGHPEK RQRNAKHNHN HGDKPCTEAS 120
  121 HPEGPSTSTQ AAHISQPPAE PVESKTDPKP PTPGVDFEQT GSS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.309804
Match: PF07491.2
Description: No description for PF07491.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle