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View Structure Prediction Details

Protein: gi|168023826, gi...
Organism: Physcomitrella patens subsp. patens
Length: 868 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|168023826, gi....

Predicted Domain #1
Region A:
Residues: [1-868]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIVYNDGF ASTGKELDGP TSVSGGEVWR LCKAGRLREA IQLLGIIKQR GLLVNSNTYG  60
   61 CVIEHCAKAR RFEDGKMVHK QLDELGVEID IYLGNSLINF YSKFEDVASA EQVFRRMTLR 120
  121 DVVTWSSMIA AYAGNNHPAK AFDTFERMTD ANIEPNRITF LSILKACNNY SILEKGRKIH 180
  181 TIVKAMGMET DVAVATALIT MYSKCGEISV ACEVFHKMTE RNVVSWTAII QANAQHRKLN 240
  241 EAFELYEQML QAGISPNAVT FVSLLNSCNT PEALNRGRRI HSHISERGLE TDMIVANALI 300
  301 TMYCKCNSVQ EAREIFDRMS KRDVISWSAM IAGYAQSGYK DKESIDEVFQ LLERMRREGV 360
  361 FPNKVTFMSI LRACTAHGAL EQGRQIHAEL SKVGFELDRS LQTAIFNMYA KCGSIYEAEQ 420
  421 VFSKMANKNV VAWTSFLSMY IKCGDLSSAE KVFSEMPTRN VVSWNLMIAG YAQNGDIVKV 480
  481 FELLSSMKAE GFQPDRVTVI TILEACGALA GLERGKLVHA EAVKLGLESD TVVATSLIGM 540
  541 YSKCGQVAEA RTVFDKMSNR DTVAWNAMLA GYGQHGDGLE AVDLFKRMLK ERVSPNEITL 600
  601 TAVISACSRA GLVQEGREIF RMMQEDFKMT PRKQHYGCMV DLLGRAGRLQ EAEEFIQSMP 660
  661 CEPDISVWHA LLGACKSHNN VQLAERAAHH ILELEPSYAS VYITLSNIYA QAGRWDDSTK 720
  721 VRRVMDDRGL KKDRGESSIE IDGRIHTFVA EDCAHPEIDA IHAELETLTK EMKEAGYTPD 780
  781 MRFVLHDVDD VQKEKALCHH SEKLAIAYGL LKTPSGTPIR IMKNLRVCGD CHTATKFISK 840
  841 IRKREIVARD ANRFHYFNNG TCSCGDFW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 1xi4A
Description: Clathrin D6 Coat
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle