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View Structure Prediction Details

Protein: GT2_ORYSI
Organism: Oryza sativa Indica Group
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GT2_ORYSI.

Description E-value Query
Range
Subject
Range
gi|162464392, gi... - gi|84794314|emb|CAJ57382.1| putative glycosyltransferase [Zea mays], gi|162464392|ref|NP_001105849.1...
582.0 [0..1] [480..1]
XXT3_ARATH - Probable xyloglucan 6-xylosyltransferase 3 OS=Arabidopsis thaliana GN=XXT3 PE=2 SV=1
581.0 [0..1] [474..1]
gi|55956988 - gi|55956988|emb|CAI11458.1| putative glycosyltransferase [Nicotiana benthamiana]
574.0 [0..1] [479..1]
gi|55956986 - gi|55956986|emb|CAI11457.1| putative glycosyltransferase [Solanum tuberosum]
571.0 [0..1] [479..1]
gi|55956984 - gi|55956984|emb|CAI11456.1| putative glycosyltransferase [Lotus japonicus]
535.0 [0..39] [480..20]
gi|55956970 - gi|55956970|emb|CAI11449.1| alpha-1,6-xylosyltransferase [Vitis vinifera]
532.0 [0..39] [472..7]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEGMGYNN GKGGGGGGGG LPMTAPRPRG ASPLSSHGHH HRSRKIHRTF NNVKITVLCG  60
   61 LVTILVLRGT IGLNLSLPNQ PTDADALAGA KAVEDIDRIL REIRSDGGAD DDAAAAGDLA 120
  121 GSFNATALNA TEAAAAYASA VERYALGPKI SDWDGQRRRW LRQNPGFPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVAGGKPRIL LVTGSQPGPC DNPLGDHYLL KTTKNKIDYC RLHGIEIVHN LAHLDTELAG  60
   61 YWAKLPLLRR LMLSHPEVEW IWWMDSDALF TDMAFELPLS RYQDRNLIIH GYQDLLFEKH 120
  121 SWIALNTGSF LFRNCQWSLD LLDAWAPMGP KGFIRDEAGK ILTANLKGRP AFEADDQSAL 180
  181 IYLLLSQKEK WMNKVFIENS YYLHGFWAGL VDKYEEMMEN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.09691
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [390-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHPGLGDERW PFVTHFVGCK PCGSYGDYPV ERCLRSMERA FNFADNQVLR LYGFAHKGLE  60
   61 SPKIKRVRNQ TTKPIDDKEN LDVKAKISTT S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle