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View Structure Prediction Details

Protein: gi|218202089
Organism: Oryza sativa Indica Group
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218202089.

Description E-value Query
Range
Subject
Range
gi|62321730, gi|... - gi|79325221|ref|NP_001031695.1| DNA binding / protein binding / zinc ion binding [Arabidopsis thalia...
164.0 [0..2] [216..10]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTKQGKKD VESYTIKGTT KIVRVGDCVL MRASDTEKAP YVGRVERLET DGRGSVRVRV  60
   61 RWYYRPEESK GGRRQFHGAK ELFLSDHFDT QSAHTIEGKC VVHSFKNYTK LDNVGPEDFF 120
  121 CRFEYKAAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1w4sA
Description: Crystal structure of the proximal BAH domain of polybromo
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [130-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAFTPDRVAV YCKCEMPYNP DDLMVQCEGC KDWFHPSCMG MTIEQAKKLD HFLCADCVKE  60
   61 NGTKRPSNSY PASSNSDSKV EPKKRKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2f6jA
Description: No description for 2f6jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle