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View Structure Prediction Details

Protein: gi|218191553
Organism: Oryza sativa Indica Group
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218191553.

Description E-value Query
Range
Subject
Range
gi|89330191 - gi|89330191|emb|CAJ84113.1| root uracil permease 1 [Oryza sativa (japonica cultivar-group)]
323.0 [0..16] [538..16]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGGGGGG AAPAPKHDEL TPHPVKDQLP GVSYCITSPP PWPEAILLGF QHYLVMLGTT  60
   61 VIIPTALVPQ MGGNNEDKAV VIQTLLFVAG INTLLQSFFG TRLPAVIGGS YTFVVPTISI 120
  121 ILAGRYANEP NPHTKFLRIM RGTQGALIVA SALQIIFGFS GLWRNVARYL SPLSAAPLVM 180
  181 LVGFGLYELG FPSVAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CVEIGLPELI LLVIFAMYLP HAIHMMKSIF DRFAVLFTIP IVWLYAYLLT VGGAYRNAPP  60
   61 KTQFHCRTDR SGIIGGAPWI RVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [280-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPFQWGAPTF DAGEAFAMMA ASFVALVEST GAFIAVSRYA SATPLPPSVL SRGIGWQGIG  60
   61 ILLDGLFGTG NGSSVSVENA GLLALTRVGS RRVVQISAGF MIFFSILGKF GAVFASIPPP 120
  121 IFAALYCIFF AYVGSAGVGF LQFCNLNSFR TKFILGFSVF MGLSVPQYFN EYTSVAGYGP 180
  181 VHTHSRWFND IVNVIFSSKA FVAGFVAYLL DNTIHRHDSS VRKDRGHHWW DKFRSYRTDT 240
  241 RSEEFYSLPF NLNKFFPSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle