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View Structure Prediction Details

Protein: MOCOS_ARATH
Organism: Arabidopsis thaliana
Length: 819 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for MOCOS_ARATH.

Predicted Domain #1
Region A:
Residues: [1-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAFLKEFGD YYGYPDGPKN IQEIRDTEFK RLDKGVVYLD HAGSTLYSEL QMEYIFKDFT  60
   61 SNVFGNPHSQ SDISSATSDL IADARHQVLE YFNASPEDYS CLFTSGATAA LKLVGETFPW 120
  121 TQDSNFLYTM ENHNSVLGIR EYALAQGASA CAVDIEEAAN QPGQLTNSGP SIKVKHRAVQ 180
  181 MRNTSKLQKE ESRGNAYNLF AFPSECNFSG LRFNLDLVKL MKENTETVLQ GSPFSKSKRW 240
  241 MVLIDAAKGC ATLPPDLSEY PADFVVLSFY KLFGYPTGLG ALLVRNDAAK LLKKTYFSGG 300
  301 TVAASIADID FVKRRERVEE FFEDGSASFL SIAAIRHGFK LLKSLTPSAI WMHTTSLSIY 360
  361 VKKKLQALRH GNGAAVCVLY GSENLELSSH KSGPTVTFNL KRPDGSWFGY LEVEKLASLS 420
  421 GIQLRTGCFC NPGACAKYLE LSHSELRSNV EAGHICWDDN DVINGKPTGA VRVSFGYMST 480
  481 FEDAKKFIDF IISSFASPPK KTGNGTVVSG RFPQLPSEDL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.69897
Match: 1p3wB
Description: Cysteine desulfurase IscS
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [521-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESKESFPSHY LKSITVYPIK SCAGFSVIRW PLCRTGLLHD REWMVQGLTG EILTQKKVPE  60
   61 MSLIKTFIDL EEGLLSVESS RCEDKLHIRI KSDSYNPRND EFDSHANILE NRNEETRINR 120
  121 WFTNAIGRQC KLLRYSSSTS KDCLNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.221849
Match: 2exnA
Description: Solution structure for the protein coded by gene locus BB0938 of Bordetella bronchiseptica. Northeast Structural Genomics target BoR11.
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [667-819]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKSPGLCRDL ESNINFANEA QFLLISEESV ADLNRRLEAK DEDYKRAHEK LNPHRFRPNL  60
   61 VISGGEPYGE DKWKTVKIGD NHFTSLGGCN RCQMINISNE AGLVKKSNEP LTTLASYRRV 120
  121 KGKILFGTLL RYEIDEKRQC WIGVGEEVNP DIE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.585027
Match: PF03473.9
Description: No description for PF03473.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle