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View Structure Prediction Details

Protein: gi|190692001, gi...
Organism: synthetic construct
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190692001, gi....

Description E-value Query
Range		 Subject
Range
gi|71682797 - gi|71682797|gb|AAI01129.1| Pyroglutamylated RFamide peptide [Homo sapiens]
 2.0E-59 [1..136] [1..136]
gi|114627226 - gi|114627226|ref|XP_001166241.1| PREDICTED: similar to preproQRFP [Pan troglodytes]
 6.0E-59 [1..136] [103..238]
OX26_BOVIN - Orexigenic neuropeptide QRFP OS=Bos taurus GN=QRFP PE=2 SV=1
 2.0E-53 [1..136] [1..134]
gi|109110018 - gi|109110018|ref|XP_001106500.1| PREDICTED: similar to RF(Arg-Phe)amide family 26 amino acid peptide...
 8.0E-50 [1..136] [1..136]
gi|73967934 - gi|73967934|ref|XP_850751.1| PREDICTED: similar to P518 precursor protein [Canis familiaris]
 1.0E-48 [1..136] [114..249]
gi|62871727 - gi|62871727|gb|AAH94274.1| Qrfp protein [Mus musculus]
 3.0E-44 [2..135] [1..124]
OX26_RAT - Orexigenic neuropeptide QRFP OS=Rattus norvegicus GN=Qrfp PE=1 SV=1
 4.0E-43 [17..135] [16..124]
OX26_PELES - Orexigenic neuropeptide 26RFa OS=Pelophylax esculentus PE=1 SV=1
 6.0E-4 [108..133] [1..26]

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Predicted Domain #1
Region A:
Residues: [1-136] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPYPLIYF LFLPLGACFP LLDRREPTDA MGGLGAGERW ADLAMGPRPH SVWGSSRWLR  60
   61 ASQPQALLVI ARGLQTSGRE HAGCRFRFGR QDEGSEATGF LPAAGEKTSG PLGNLAEELN 120
  121 GYSRKKGGFS FRFGRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle