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View Structure Prediction Details

Protein: gi|218199211
Organism: Oryza sativa Indica Group
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218199211.

Description E-value Query
Range
Subject
Range
gi|49387718, gi|... - gi|51963770|ref|XP_506665.1| PREDICTED OSJNBa0048A13.16 gene product [Oryza sativa (japonica cultiva...
gi|218202089 - gi|218202089|gb|EEC84516.1| hypothetical protein OsI_31224 [Oryza sativa Indica Group]
163.0 [0..1] [218..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSRPPKRI LESYTIKGSD KVIKPGDCVL MRASDTSKPP YVARVEAIEA AGSRGTNVRV  60
   61 RVRWYYRPEE SMGGRRPFHG AKEVFLSDHY DVQSADTIEG KCNVHSFRSY TKLDSVNAED 120
  121 FFCRFEYKSA TGSFVPDRIA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 1w4sA
Description: Crystal structure of the proximal BAH domain of polybromo
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [141-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VFCKCEMPYN PDDLMIQCEE CSDWFHPSCI GMTIKDAKKL EHFFCQSCTA ENGKMAENSH  60
   61 EATAQSEEKQ VESKRRRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.522879
Match: 2f6jA
Description: No description for 2f6jA was found.

YRC Informatics Platform - Version 3.0
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