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View Structure Prediction Details

Protein: gi|192283193, gi...
Organism: Rhodopseudomonas palustris TIE-1
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|192283193, gi....

Description E-value Query
Range
Subject
Range
SYV_BORPE - Valine--tRNA ligase OS=Bordetella pertussis GN=valS PE=3 SV=1
SYV_BORPE - Valine--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=valS PE...
122.0 [0..6] [136..832]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSDSAGSA NHVSVTINGR QYRMACEPGQ EPQLLGLAEN LETRIQSLRG RFGEIGDARL  60
   61 TVMAALMMAD ELLDAHGRIA SLQQEVDALR NDRAAALDRT VSTNRAVAAA LNSAAERIER 120
  121 TTQVLNRTIG GGIAIG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1gaxA
Description: Valyl-tRNA synthetase (ValRS) C-terminal domain; Valyl-tRNA synthetase (ValRS)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle