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View Structure Prediction Details

Protein: gi|192289718, gi...
Organism: Rhodopseudomonas palustris TIE-1
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|192289718, gi....

Description E-value Query
Range
Subject
Range
gi|86571960, gi|... - gi|86748932|ref|YP_485428.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2], gi|865...
210.0 [0..1] [235..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADVTQLA PAVSTDVSLL SLFWHAHWVV KSIMLGLLGC SVWVWAIAID KLLLFSRTKR  60
   61 AMDRFEQAFW SGESIDELYR ALSAKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 THSMAACFVA AMREWKRSFE SHSRSFAGLQ MRIEKVMNVS IAREVERLER RLLVLATVGS  60
   61 AGPFVGLFGT VWGIMSSFQS IAASKNTSLA VVAPGIAEAL FATAIGLIAA IPATIFYNKF 120
  121 TSEVNRQTQR LEGFADEFSA ILSRQIDERT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.221849
Match: PF01618.7
Description: No description for PF01618.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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