YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|213428608
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
Length:	404 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|213428608.

Description	E-value	Query Range	Subject Range
gi\|693933 - gi\|693933\|emb\|CAA59331.1\| 2-phosphopyruvate-hydratase alpha-enolase; carbonate dehydratase [Homo sap...	1.0E-94	[1..361]	[1..415]
gi\|60824596, gi\|... - gi\|61373094\|gb\|AAX43977.1\| enolase 1 [synthetic construct], gi\|61364993\|gb\|AAX42637.1\| enolase 1 [sy...	1.0E-94	[1..361]	[1..415]
gi\|38649320 - gi\|38649320\|gb\|AAH63174.1\| Eno1 protein [Rattus norvegicus]	1.0E-94	[1..361]	[39..453]
gi\|108996411, gi... - gi\|108996413\|ref\|XP_001098778.1\| PREDICTED: enolase 1 isoform 7 [Macaca mulatta], gi\|108996411\|ref\|X... gi\|90076162 - gi\|90076162\|dbj\|BAE87761.1\| unnamed protein product [Macaca fascicularis]	2.0E-94	[1..361]	[1..415]
ENOA_PONAB - Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1 ENOA_PONPY - Alpha-enolase - Pongo pygmaeus (Orangutan)	3.0E-94	[1..361]	[1..415]

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Predicted Domain #1

Region A:
Residues: [1-404]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVGAEVFV TCPGRNFVTL KITTEDGITG LGDATLNGRE LSVASYLTDH LCPQLIGRDA  60
   61 HRIEDIWQFF YKGAYWRRGP VTMSAISAVD MALWDIKAKA ANMPLYQLLG GASREGVMVY 120
  121 CHTTGHTIDD VLEDYARHKE QGFKAIRVQC GVPGMKTTYG MAKGKGLAYE PATKGQWPEE 180
  181 QLWSTEKYLD FTPKLFDAVR NTFGFNEHLL HDMHHRLTPI EAARFGKCIE DYRLFWMEDP 240
  241 TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTITH AGGITGMRRI 300
  301 ADFASLYQVR TGSHGPSDLS PVCMAAALHF DLWVPNFGVQ EFMGYSEQML EVFPHNWTFE 360
  361 GGYMHPGDKP GLGIEFNEKL AAKYPYDPAY LPVARLEDGT LWNW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.0
Match:	2pozA
Description:	No description for 2pozA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits